Entry |
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Name |
(GenBank) phytochrome-like protein cph1
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KO |
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Organism |
rti Rufibacter tibetensis
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:rti00001]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DC20_14300
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:rti01001]
DC20_14300
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:rti02022]
DC20_14300
Enzymes [BR:rti01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
DC20_14300
Protein kinases [BR:rti01001]
Histidine kinases
Other
DC20_14300
Two-component system [BR:rti02022]
Other families
SagS-HptB-HsbR (swarming activity and biofilm formation)
DC20_14300
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
3506255..3508813
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AA seq |
852 aa
MDSALASAREETARGENPPFLKIFEAQAGLVLLLNPELKIQAASDAYLRETLTKRKDIIG
KHVFTVFPDNPEEANESPTKNLMASFEQIFATGKSHKMEIIRYDIPDPERPGYFVERYWS
TCNTPVLDDQGNITCIIHETNNVTESEKAKRQLLKSQQREQTALAQAEQHRIRLERLFDQ
APAALAILEGPELVYKVINKAYQHLFPGRQLMGLGLFEALPELKNQPIDNIIRTVYETGE
TFEGKEVLIPVARYEGQAPEDIYWNFIYQALYDTQGQINGVLIFALDVTEFVKARQQAEK
SAEILQTLNQQLEEKVIQRTKALQLAQAEAEKQKHRLERLFTDAPAAICILDGSDMVFEL
VNPTYQQLFPGRQLGGKPILEGLPEVEGTVVHQTLLQVYETGITHQEEEMCVPFVRPLDG
VVENRYFKYIQQPRYNEHGLIDGILVLAFEVTEQVESRRAVEASARQLRLITDSLPVLIG
YLDKDEVYRFTNKAYETWFPHKAESILGRKVRDVVGDKAYQNVKVYIERALAGERLDFEA
TMPYKDGFTKHIRTSYVPDIQEGKVAGFYTLVTDVTEQVESRLAIEKSEKEAKAMAEELA
ATNEELASINEELQDTNQQLTHTNSDLDNFIYTASHDLKAPISNIEMLMAELLVELPKDS
LAQGEVETIIGMMKGAIDRFKKTIKNLTEITKLQKDHLIETKVVSVKEVVQEVILDMEQM
IQKSEAQLDVELNKCPFISFSEKNLRSIFYNLLSNAIKYRHPARKPFIQVRCHLEKEYLV
LTVQDNGLGLSSDEQKKLFTMFRRFHDHVEGSGVGLYMVKRMVDNAGGKIEVDSQKGEGA
TFKVYLKNNSFV |
NT seq |
2559 nt +upstreamnt +downstreamnt
atggatagcgcattagcctccgcaagggaggaaaccgcaagaggtgaaaacccgcctttt
ctaaagatatttgaagcccaggccggactagttttacttcttaaccctgaattaaagata
caggctgcctcagatgcctacctgagagagacgctcaccaaacggaaagatatcataggc
aaacatgtattcacggttttccctgataatcctgaggaagcaaatgaatctcccaccaaa
aacctgatggcttcttttgagcagatctttgctaccggcaagagccacaagatggagatc
ataagatatgacattcctgacccagagcggcccggctattttgtggaacgctactggagt
acctgcaacacccccgtgttagatgaccagggaaacatcacctgcatcatacacgagaca
aataatgtaactgaaagcgagaaagccaaaagacagctgctgaaaagccagcaaagggag
caaactgccttggcacaggccgaacagcaccgcatacgcctggagcggctctttgaccag
gctcccgcagccctggcaatactggagggaccggagctggtgtacaaggtgatcaacaaa
gcatatcagcatcttttcccgggtaggcaactgatgggattgggtttgtttgaagcactt
ccggaactcaagaaccagcccattgacaacatcatccggacggtatatgaaaccggcgaa
acgtttgaaggaaaggaagtgctgattccggttgcccgctatgaaggtcaggcaccagaa
gacatttactggaatttcatttaccaagctctttatgatacccaaggacaaataaacgga
gtactgatctttgctctggatgtgacagaatttgtgaaggcgcgccagcaggcggagaaa
agtgctgagattttgcaaacccttaaccagcaactggaagaaaaggtaatacaaagaaca
aaagccttgcagctagcccaggccgaagccgaaaagcaaaagcaccgcttagagcgcctt
ttcaccgatgccccggctgccatctgtattctggatggctctgacatggtgtttgaattg
gtaaaccccacctaccagcaactatttccgggcaggcagctgggcggaaaacctatccta
gaaggcttgccagaggtagaggggacagttgttcatcaaaccttgctgcaggtgtacgaa
accggtatcacgcaccaggaagaggaaatgtgcgttccgttcgtccggcccctcgacgga
gtggtagagaaccggtacttcaaatacattcagcagccccgctataatgagcatgggctt
atagatggcattttggtgctggcgtttgaagtcactgaacaggtagaatcacgcagagca
gtagaggcaagcgcccggcaattgaggctcatcacagactctttgccggtgctcatcggg
tatttggacaaagacgaggtgtaccggtttacgaacaaggcttatgaaacctggttccct
cacaaagccgagagtattttgggaagaaaggtgcgggacgttgtgggtgacaaagcttac
cagaacgtgaaggtgtacattgagcgcgcattggccggtgagcggcttgactttgaggca
accatgccgtacaaagatggcttcacaaagcacatccggaccagctacgttccagacatt
caggaaggcaaagtggctggtttttataccctggtgacagacgtaactgagcaggtggag
tcgcgcctggctatagagaaaagtgaaaaggaggccaaagccatggccgaggaactggcg
gccaccaatgaagaattagcttccatcaacgaggaactccaggacaccaaccagcaactc
acccacaccaactcagacctggataactttatctacacggcctcgcatgatttgaaggct
cctatctccaacatagaaatgctcatggcagaactgttggtggaactgcccaaggatagc
ctggcacagggagaggtagaaaccatcatcggcatgatgaagggcgccattgaccgcttc
aaaaaaaccatcaaaaacctgacagaaatcaccaagctgcagaaagaccacctcattgaa
accaaggtggtaagcgtcaaagaggtagtgcaggaggtaatactggacatggagcaaatg
atccagaaatcagaggctcaactagacgttgagttaaacaaatgcccttttatctccttt
tcagagaaaaacctgcgcagcatcttctataacctgctttccaacgccatcaagtaccgt
cacccagctcgtaagccattcatacaggtgaggtgccatctggagaaagagtacctggtg
ctcactgtacaggacaatggactgggattgagttctgacgagcaaaagaagctcttcacc
atgttccgccgcttccatgaccacgtagagggatctggcgtaggactgtatatggtaaag
cgcatggtagacaatgcaggaggaaagattgaggttgatagccaaaaaggagagggtgcc
acgtttaaggtctaccttaaaaataattcttttgtctaa |