Rufibacter tibetensis: DC20_15280
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Entry
DC20_15280 CDS
T04099
Name
(GenBank) SusC/RagA family TonB-linked outer membrane protein
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
rti
Rufibacter tibetensis
Brite
KEGG Orthology (KO) [BR:
rti00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rti02000
]
DC20_15280
Transporters [BR:
rti02000
]
Other transporters
Pores ion channels [TC:
1
]
DC20_15280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plug
CarbopepD_reg_2
CarboxypepD_reg
Motif
Other DBs
NCBI-ProteinID:
ALJ00086
UniProt:
A0A0P0C954
LinkDB
All DBs
Position
3748535..3751798
Genome browser
AA seq
1087 aa
AA seq
DB search
MQQALLKKSRYLLVLTFFFTSVVGAFAQTVTITGKVTDDKKEGLPGVTVLLKGTTTANAT
DVEGNYSLAVPNGTGTLVFSYIGFVSQEVPINGRTNINLAMVSDSKAIDEVVVVGYGTVT
RKELTGSVASVTAKDIQDIPVSTAAEALAGRLAGVQVTSTEGRPGADIQVRVRGGGSLTQ
DNSPLYIVDGIQMENALSIISPQEIESVDVLKDAASTSIYGARGANGVVIITTKGGREQK
TQVTYTGFAGVRKIVNKLEVMNPYDYAMYQYESYNLFTNANDESRTSFRDRYGRFEDLEI
YKSMPMTDWQDRVFGRDAFSQTHVLGVTGGSKETSFNFTLNHAAEEGIMINSGYERTLAS
FKFDHKVTDRFKVGLTTRYSRQRIDGVGTSSTGSQANNRLRNAVRFRPFIAPGFESQADE
FDVEYASSTQLTSPVLLANNEIRRDYRNDIIVNGWFSYDIIKNLTFRSVIGVNALDRKTN
DFSGTVTALARQNNDQPVVDMTGGEAFSLTNSNTLTYKRKIAEDHNLDFLLGHELVEWNS
KGRGIRTRYLPVDITPEQAFAGVQKATAPAGLIQDNPTTSESSTRLLSFFGRVGYNYKGK
YFANFNLRRDGSSLFADGNRYGTFPSASLMWRVADESFMESAQNWLSDLKVRLSVGSVGN
NRIGVDLFRTMYMATTNDGYAFNEAITPGYVAPSLANANLVWESTLSKNLGVDFAFFQNR
LTGSIDAYQNRTKDLLLFAQIPSHSGYPGQLQNIGETENKGIELQLGAVVVDKGDFRWNA
NFNIARNRNKIVSLGLDPSGQAKQSYLVQSGWVNSLEDFKVEVGQPIGQFFGYVTDGYYT
VDDFNATFNTATNTWTYVLKEGIANSSSVALGNRQPQPGDLKLKDLSDNNSSLISTEDRT
VIGNAQPKFTGGFNQQFSYKGFDLSVFMVFSYGNKVYNANKMEFTTQYTTRDNNMLALMN
DRFKLYDENGQRVSDPEQLKALNANAKYWRPSLGNYFLHSFAIEDGSFLRISNLTLGYSI
PEAIIKRTRVISKLRVYATVNNLHTFTKYTGYDPEANTRRNSPLTPGVDYAAYPRSRYIL
GGINVTL
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaagcattacttaagaagagcaggtacctgctggtactgacttttttctttaca
tcggtagtgggtgcctttgctcagactgttactatcacggggaaagtaactgatgataag
aaggaaggcctgccaggtgtaactgtactactaaaaggtactaccactgccaatgccact
gacgttgaagggaattactccctggcggtgcccaacggaaccggcactttggtgttttct
tacataggtttcgtttctcaggaagtgcctatcaatggaagaaccaacatcaatttagcc
atggtgtcagactctaaggcaattgatgaagtggtggtggtaggttacggtactgtgacc
agaaaagaactaactggttctgtggcctctgtaacagctaaagatattcaggatattccg
gttagtacagccgcagaggcgctggcaggtagattggccggggttcaggtaacttcaact
gaaggccgacctggagctgatatccaggtgagagttcgtggtggtgggtcgcttacacag
gataattctcctttatatatagtagatggtattcagatggagaatgccttgtctattatc
tctccgcaagaaattgagtctgttgacgtgttgaaagatgctgcttctacttctatctat
ggggccagaggcgcaaacggggtggtgatcattactacaaaagggggtagagagcaaaag
acgcaagttacttatacaggatttgccggggtaagaaagattgtgaacaagctagaggtg
atgaacccctacgattacgccatgtatcagtacgaatcttataatttgtttaccaatgcg
aacgatgaaagccgcacttctttcagagaccggtatggcagatttgaagatctagaaatc
tataaatctatgcccatgactgattggcaggatagggttttcggtagagatgccttcagt
cagacccacgtattaggggttactggtggttccaaagagacctcattcaattttaccctg
aatcatgccgccgaagagggaatcatgattaactcaggatatgagagaactttggcttcc
tttaagtttgaccataaggtgacagataggtttaaggttgggttaacaacccgttatagc
cgtcaacggattgatggggttggtacatcaagcactggttcacaggccaataaccggtta
agaaatgccgtgcgtttcagaccatttatagcgccaggttttgaaagccaagcggatgaa
tttgacgtggagtatgcaagcagcactcagttaacaagccctgtgctgttggcaaacaat
gaaatcagacgtgactaccgtaatgacattattgtgaacggttggtttagttatgacatc
atcaaaaatttaaccttcagatctgtaataggggtaaatgccttagataggaaaacgaat
gattttagtggtactgtaacagcactggctagacaaaataatgatcagccagtagttgat
atgacaggaggagaggctttctccttaactaattccaacaccttaacttacaagagaaag
attgcagaagatcataatctggacttcttattaggacatgaactggtggagtggaacagc
aaaggcagagggatacgcaccagatatttgccggttgacatcacgccagaacaggctttt
gccggtgtccaaaaagctactgcgcctgctggattgatccaggataacccaacgacctct
gagtctagtactagacttctttctttctttggaagagtaggttataactacaaaggcaaa
tatttcgcgaattttaacttaagacgcgacgggtcttccttgtttgccgacggaaatcgt
tatggtaccttcccttctgcgtctttaatgtggcgtgtagcagatgagtctttcatggag
tctgctcaaaactggctaagcgatttgaaagtgcgcttgagtgttggtagtgtgggaaat
aaccgtattggggttgacttattcagaaccatgtatatggctacgaccaatgacgggtat
gctttcaatgaggccatcactccgggttatgtagcccctagcttggcaaatgctaatctg
gtttgggagtctaccctctccaagaacttaggtgttgactttgctttcttccagaaccgt
ttaacaggttctattgacgcctaccaaaacagaacgaaagatctacttttatttgctcaa
attccgtcacacagcggttatcctgggcagcttcagaacattggagaaaccgaaaacaaa
gggattgaacttcagttgggtgcggtagtagtagataaaggtgactttagatggaatgct
aatttcaacatcgcgaggaaccgcaacaaaatagtgagcctaggtttggatccatctgga
caggcaaagcaatcttatttggttcagtcgggttgggttaactccttagaagatttcaaa
gttgaagtaggtcagcctattggtcagttcttcggctatgtaacagatggctactatacg
gttgatgattttaatgccactttcaatactgctaccaatacctggacttatgtgttgaaa
gaaggtatcgccaatagctcaagtgttgcccttggtaacagacagccgcaaccgggtgat
cttaaattgaaagatctttctgacaacaacagttctttgatctctacggaagaccgcacc
gtcattggtaacgctcaacctaaattcacaggtggcttcaatcagcagttttcttacaaa
ggctttgacttgagtgtattcatggtgttttcttacgggaacaaagtgtataacgcgaac
aagatggagtttacaacccagtacaccaccagagacaacaacatgttggctcttatgaat
gaccgctttaagctgtatgatgagaacggtcagagagtatctgatcctgagcaactgaaa
gccttgaatgcaaacgcgaaatactggagaccctctttaggtaactacttcctgcactcc
tttgcaattgaagacggctctttcttaagaatcagcaacctaaccttagggtacagcatt
ccagaggctattatcaaaagaaccagagtaatctccaaattaagagtgtacgccactgtg
aataacctgcacacctttacaaaatacacaggttatgatccagaggcaaacaccagaaga
aactctccacttactccgggtgttgactacgcggcttatccacgcagcagatacattttg
ggtggtataaacgtgacattgtaa
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