Rufibacter tibetensis: DC20_16320
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Entry
DC20_16320 CDS
T04099
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rti
Rufibacter tibetensis
Pathway
rti03420
Nucleotide excision repair
rti03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rti00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DC20_16320
03430 Mismatch repair
DC20_16320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rti03400
]
DC20_16320
Enzymes [BR:
rti01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DC20_16320
DNA repair and recombination proteins [BR:
rti03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DC20_16320
MMR (mismatch excision repair)
Other MMR factors
DC20_16320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PcrA_UvrD_tudor
AAA_12
ResIII
AAA_11
nSTAND3
DEAD
Motif
Other DBs
NCBI-ProteinID:
ALJ00249
UniProt:
A0A0N7HWU8
LinkDB
All DBs
Position
complement(4008406..4010643)
Genome browser
AA seq
745 aa
AA seq
DB search
MDYLKLLNESQRAAVLNTEGPCMIIAGAGSGKTRVLTYRIAHLLEKGVDPFNILSLTFTN
KAAKEMRERIEKVVGPEAKNLWMGTFHSVFSRILRAEAQKIGYPSHFTIYDSDDSKTLIR
NIVKEMNLDDKLYKPNMVLGRISAAKNKLISVAQYLRDPAIQADDEAALRPKIGQIFKTY
AERCFKAGAMDFDDLLFNTNVLFRDHVDVLNKYQHIFKYVMVDEYQDTNYSQYLITRKLS
AKDRNICVVGDDAQSIYAFRGADIQNILNFERDYPELEVFKLEQNYRSTQHIVKAANSVI
KNNKAQLRKDVFSQNEEGQLIDVIKASSDNEEGKLVAHAIFEEKMNQHLSYEDFAILYRT
NAQSRAMEEALRKMNIKYRIVGGLSFYQRKEIKDLISYLRLAINHNDEQALRRVINYPKR
GIGDTTIEKVIVTANETDHSLWEVVSHANQLLGGRAGAAIQDFATKIKSFAVMAQEKDAF
EAATYIAKHSGLVDDLYSDKSVEGLARYENIQELLNAIKEFVDDPEKEDNSLALFLQDIA
LLTDTDTKKEEEGEYVTMMTIHSAKGLEFRNVFIVGMEENLFPSQMMLQSRADLEEERRL
FYVAITRAEKKLTLSYATSRYQWGNLRAAEKSRFIDEIDPTFLNFKFGDERGPFEKVLQR
KTPVAQLISPAKKPSAAPAYNPPADFTPSDTSNLQEGMRVEHPKFGFGNVTKIDNQGNSI
KAIIEFEGVGEKTLLLSFAKLRIHA
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggattacctgaaactcctgaatgagtcacagcgagccgctgttttaaataccgaaggc
ccttgtatgattattgccggggcgggctccggcaaaacccgggtgcttacctatcgcatt
gcgcacttactggagaaaggcgttgatccgttcaacattctctccttgacctttaccaac
aaggctgccaaagagatgcgggagcggatcgaaaaagtagtaggacctgaagccaagaac
ctttggatgggaaccttccactctgttttttcccgcattcttcgcgccgaggcgcagaaa
ataggctacccaagtcactttaccatctatgattctgatgactccaaaactctcatcaga
aacatagtgaaggagatgaacctggatgacaagctctacaaacctaacatggtgttaggg
cgcatctcggccgctaaaaacaaacttatctcggtagctcagtacctgcgtgaccccgcc
atccaagccgatgatgaggcagcacttcgtccgaaaataggccagattttcaaaacctat
gctgaacggtgcttcaaagccggcgccatggattttgacgatttgctcttcaataccaac
gtactctttagagaccacgtggatgtgctcaacaagtaccagcacatcttcaagtacgtg
atggtagatgagtaccaggatacaaactacagccagtacctgattacccgcaagctttcg
gccaaagaccggaacatctgcgtggtgggtgatgatgcccaaagtatctacgctttccgc
ggggccgatattcagaacatcctcaactttgagcgtgattatcctgaactggaggtgttt
aaactggagcaaaactaccgctctacccagcacattgtgaaggcggctaactcggtgatc
aagaacaacaaagctcagttgcgcaaagacgttttctcccagaacgaggaaggacaactc
attgacgtcatcaaagccagttcagacaacgaagaaggcaaactggtggcgcacgccatc
tttgaagagaagatgaaccagcacctctcctatgaggactttgccattctttatagaacc
aatgctcagtccagggctatggaagaggccttgcgcaaaatgaatatcaagtaccgcatt
gtaggtggcttgtcgttctaccaacgcaaagagatcaaagacttgatttcctatctgcgc
cttgccattaaccataatgatgagcaggcgctgcgtcgtgtgatcaactatcctaaacgg
ggaattggtgacactaccattgaaaaggtgattgtcacggctaatgaaacggaccatagc
ctatgggaagtagtgagccacgcaaaccaattgttaggcggaagagccggtgctgccatt
caggacttcgcgaccaagatcaaaagctttgcggtaatggcccaggagaaagatgcgttt
gaggccgctacctacatagccaaacactctggcctggtagatgatctgtactcagacaaa
tcggtggaaggtctggctcgttacgagaacatccaggagctcctgaacgccattaaggag
tttgtggacgatccggagaaagaagataattcactggccttgttcctgcaagacatcgcc
ctgcttactgacactgacacaaaaaaagaagaggaaggtgagtacgtgaccatgatgacc
attcactcggccaaaggtttggagtttagaaatgtgttcattgtgggcatggaggaaaac
ctgttccccagccagatgatgctacaatcacgcgctgacctggaagaagagcgacgcctg
ttctacgtggccattacccgtgccgagaagaaattgaccctctcctacgctaccagccgt
tatcagtggggtaacctgcgggccgcggagaaaagccggttcattgacgagattgatccc
acgttcctgaactttaagtttggcgatgagcgcgggccgtttgagaaagtgttacagcgg
aaaaccccggttgcgcaattgatcagcccggccaaaaaaccttcggctgcccctgcctat
aacccaccggctgactttactccgagcgatacttctaacctacaggagggtatgcgcgta
gagcaccctaaattcgggtttggtaacgtgaccaagattgataaccagggaaattctatc
aaggcaatcattgagtttgagggcgtaggtgaaaaaaccctgctcctaagcttcgccaaa
cttcggatacacgcgtaa
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