Rufibacter tibetensis: DC20_16965
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Entry
DC20_16965 CDS
T04099
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rti
Rufibacter tibetensis
Pathway
rti03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rti00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DC20_16965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rti03400
]
DC20_16965
Enzymes [BR:
rti01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
DC20_16965
DNA repair and recombination proteins [BR:
rti03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DC20_16965
Prokaryotic type
DC20_16965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
PTHB1_CtH
Motif
Other DBs
NCBI-ProteinID:
ALJ00352
UniProt:
A0A0P0D004
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All DBs
Position
4157283..4157945
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AA seq
220 aa
AA seq
DB search
MQVKIENSWQQVLQGEFEKPYFQNLISFVKEEYTSTEVYPPGRQIFHAFDECPFDKVRVV
ILGQDPYHGLGQANGLAFSVAEGMRTPPSLLNIFKEIEADLGKPIPRSGNLERWAEQGVL
LLNATLTVRAHQAGSHQKKGWEEFTDAVIKKVSDEKEHVVFLLWGAYAQKKGLIIDDKKH
LVLKAAHPSPFAADKGFFGTRHFSKTNVYLREHGLPEINW
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtaaaaatagaaaacagttggcaacaagtgcttcagggcgaatttgaaaagcct
tatttccagaacctaatctcttttgtaaaagaggagtacacctccacagaagtttatccg
cctgggcgccagatttttcatgcctttgacgaatgtccttttgataaggtgcgtgtcgtg
attctagggcaagacccgtaccatggactaggccaggcgaatggattagctttctccgta
gcggaaggaatgcgaacgccaccttctttgcttaacatatttaaagaaatagaggcagat
ttaggaaaaccaatcccaaggtcaggtaacctggagcggtgggcagagcagggggtactt
ctgctgaacgctacgttaactgtacgagcacaccaggcaggttcgcatcagaaaaaggga
tgggaggagtttaccgacgcagttatcaagaaggtctcagatgaaaaagagcatgtggta
tttctgttatggggtgcctacgctcagaagaaaggtttgattatagatgataaaaagcat
ctagttttaaaagcggctcacccttctccgtttgctgcagataaagggttcttcggaaca
cggcacttcagcaagacaaatgtttatctgcgggagcacggtttgcctgagataaactgg
taa
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