Rufibacter tibetensis: DC20_17160
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Entry
DC20_17160 CDS
T04099
Name
(GenBank) hypothetical protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
rti
Rufibacter tibetensis
Brite
KEGG Orthology (KO) [BR:
rti00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rti02000
]
DC20_17160
Transporters [BR:
rti02000
]
Other transporters
Pores ion channels [TC:
1
]
DC20_17160
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
PD40
DUF748
TPR_2
TPR_1
TPR_14
CarboxypepD_reg
ARM_TT21_C
TPR_20
Motif
Other DBs
NCBI-ProteinID:
ALJ00384
UniProt:
A0A0P0CY92
LinkDB
All DBs
Position
4204523..4206448
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AA seq
641 aa
AA seq
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MLLFSRLCLFLLLFIGVTSTSVGQKAAGGSVNSKAQKSFDEGIKYVQARNFEKALESFNE
ATKRDTTFGEAYVQAAGLYRILQKEEEAYQNYRRGLPKMEVKPSMYADFFNFAELAFARG
RYDEASTFYDRFLQFGKKNTPQARHAAQQLKNVTFAQKAIKEPVNFNPKPLGDVVNKFGL
QYSPVLTTDQNALLFTAREGSGPLDDEDLFLAYRKEGQWQAPVSVSTAINSELNEGAASL
SGDGRVLVFTSCNRQDSYGSCDLYISYREGNEWSKPKNMGRNVNTSSWDSQPTLSADGRT
IYFASNRKGGLGGEDIWLTKQQEDGTWSIPLNLGKNVNTPGRENSPFLHASGNTLYLSSD
GREGMGGLDLFKVNREKDGWGIPQNMGYPLNTHRDESSIFISPDNKTGYYSGQSAAGGKV
EVALLQFEVPEVWKGKTISSFAQGRVFDAVSKKPLKATVQVYDLDSAGVITQQVRSDGTS
GEYTIVLNQKQRYALYVTAPDHVLESRHISGTSTSAPLALDFYLQPLSKGAKAVLSNIFF
DTGKAELRPESQTELDKLFQFLKANPKIKVEIAGHTDNVGQAAANQKLSEARAKAVVKYL
VSKGAPATLFQAKGYGQTQPAAPNTSDENRQLNRRIELRIL
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgctgcttttctcacgtctatgcctttttcttcttctgtttattggggtaacaagtact
tcggtaggtcagaaagcagctggtggttctgtcaattcaaaggcgcaaaaatcctttgac
gaaggtatcaagtacgtgcaggcccgcaactttgaaaaggccctggagtcttttaatgag
gcaactaagcgtgacaccacgtttggcgaggcatatgtgcaggcagcaggtttataccgc
attctacaaaaggaagaagaagcgtaccaaaactaccgtcgcggcttgccgaagatggag
gtcaagccctctatgtacgctgactttttcaacttcgcggaactagcttttgcccggggc
cggtatgacgaggcttccaccttttatgatcgatttctgcagttcggaaaaaagaacact
ccccaggcccggcatgcagcccaacagctcaagaatgtcacctttgcccagaaagccatc
aaagaaccggtgaacttcaatcccaaacctttgggtgacgtggttaacaaattcgggctg
cagtattctcctgttttaaccaccgatcagaacgcgcttttgtttactgcccgtgaggga
agtggccccttagacgatgaagatttgtttttggcttaccgaaaagaaggacagtggcag
gcaccggtttctgtttccacggccattaattcagagctgaatgaaggagccgcctccctt
tccggcgacggccgggtgctggtatttacgtcttgtaaccgccaggactcttacggctcc
tgcgacctgtacatcagttaccgtgaaggcaatgagtggagcaagcccaagaacatggga
cgcaatgtcaatacctcttcctgggactctcaacccacgctctctgctgacggccgcacc
atttactttgcctctaaccgaaaaggtggtttgggcggcgaggacatctggctaacaaaa
caacaggaagacggcacctggagcatacccttgaatctcggaaaaaatgtgaataccccg
ggccgggaaaactccccgtttcttcatgccagtggcaatactttgtacctttcttctgat
ggacgtgagggcatgggtggattggacttgttcaaggtaaaccgggagaaagacggctgg
ggcattccgcagaacatgggctatcctttgaacacccatcgtgatgaaagctctatcttc
atttctccagataataaaaccgggtattactcggggcaatcagctgcaggtggtaaagta
gaggtagccttgctgcagtttgaggtgcctgaagtctggaaaggaaaaaccatttcttcc
tttgcacaaggccgcgtttttgatgctgtttctaaaaaaccgttaaaagcgaccgtgcag
gtgtatgacctggactcagcgggggtgatcacgcaacaagtacgttcagacggaacttca
ggggaatacaccattgtgctgaaccagaagcaacggtatgccttgtatgtaaccgctcca
gaccacgtgctggaaagccgccatatctcgggtacctccacctcagcaccgctcgcgtta
gacttctacctgcaacctttaagcaagggagccaaagccgtgctcagcaacattttcttt
gatacaggcaaagccgaactgcgtccagagtcacagacggagttagacaagcttttccag
tttctgaaggcaaatcctaaaataaaggtggaaatagctggccatacagataacgtaggc
caagccgccgcaaaccagaaactttctgaggcccgcgcaaaagcggtagtgaagtacctg
gtttcgaaaggcgcaccagccacgctcttccaagccaaaggttatggtcaaacccagccc
gcagcgccaaatacctcagacgaaaaccggcaattgaaccgccggattgagcttcgaatt
ctttaa
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