Rufibacter tibetensis: DC20_17555
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Entry
DC20_17555 CDS
T04099
Name
(GenBank) hypothetical protein
KO
K21470
L,D-transpeptidase YcbB
Organism
rti
Rufibacter tibetensis
Brite
KEGG Orthology (KO) [BR:
rti00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rti01002
]
DC20_17555
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rti01011
]
DC20_17555
Peptidases and inhibitors [BR:
rti01002
]
Cysteine peptidases
Family C82
DC20_17555
Peptidoglycan biosynthesis and degradation proteins [BR:
rti01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
DC20_17555
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
ALJ01548
UniProt:
A0A0P0CVB5
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Position
4300913..4302586
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AA seq
557 aa
AA seq
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MKSNKPFIPFLMLFLLTFVLVSSCAKSGDKQQKKVALAAAKEFPQQTDSVYVVTFTKQDP
DFKEHLGLMKLFYRERQYRFAWFKDGELVPQAFKFMEVLNKAHEEGLNPQDYDRKDLKKM
IQTLEQSTNDSVRHKLQEELDVTLTASYFNYASDFYRGTVNPRNLDNIEWEVKKNKIKLH
KALQTILRERESRYPYYEFEALHPDYKRLREALKQYRLAKQQGGWPKIELATKMLKPGDS
AQAVLTLRHRIMGKPAPNVPQSMVYDPALAAGVKNFQIRHGLKPDGVVGGETLRVMNVPI
EQRIDQIIINMERWRWVPKRFEDKYVLINIPEYMLHVYEKGKEVLNMKVVVGKEMHATPV
FSDKLEYIVFYPYWNVTPQILEEEIAPAQANNPNYLASNDMELVKDIGNNKVEVVSPSSV
DWYSVDKNFKYRVRQRPGSKNPLGYVKFIFPNEHNVYLHDTPSDHLFNQTERGFSHGCIR
IEKPFEFAQYLLKDQKQWTPSTINAAMHGGQEKYVNLTAKVPVYIVYFTSWVDDKGAVHF
RDDIYNHDRDLEMAYFR
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcaaataaaccatttattcctttcttaatgcttttcttgttaaccttcgtgctg
gtctcgtcctgcgccaagtctggtgacaagcagcaaaagaaggtagcgctggcagctgcc
aaagaatttccgcaacaaaccgacagtgtgtacgtggtcaccttcactaaacaggacccg
gatttcaaagaacacttgggcctaatgaagttattttaccgggagcggcagtaccgtttt
gcctggtttaaagacggggagttagtaccacaggctttcaaattcatggaagtcttgaac
aaagcacatgaagaagggttaaacccgcaggattatgacagaaaggatttgaagaagatg
attcaaacactggaacaatctaccaatgactctgtgcgccacaaactgcaggaagaacta
gacgttacgctaacggcttcttatttcaactatgccagtgatttttaccgtggcacggta
aacccccgcaacttggataacattgaatgggaggtaaagaaaaacaagataaagctgcac
aaggcgctgcaaaccattttgagggaacgggaaagtcgttacccatactatgagtttgaa
gcccttcatccagattataaacgtctgcgcgaagccttgaagcagtaccgtttagccaaa
cagcagggagggtggcctaaaattgagctcgccactaagatgttgaaacccggtgactca
gcgcaagccgtcttaacgcttcgccaccgcatcatgggtaaaccagctcctaatgttccc
caaagcatggtgtatgatccagccttggctgcaggggtaaagaatttccagatacggcat
ggcctgaaaccagacggtgttgttgggggagagaccctgcgcgtgatgaatgtgccgatt
gaacaacggattgaccagatcatcatcaacatggaacggtggcggtgggtacctaaacgt
tttgaagataaatacgtgctcatcaatattcctgaatacatgctgcatgtatatgagaaa
gggaaagaagtcttgaatatgaaggttgtagtgggtaaggaaatgcacgccactcctgtg
ttcagtgacaaactggagtacattgttttctatccttactggaacgtaacacctcagatt
ctggaagaggagattgcgccagcgcaggccaacaaccctaattaccttgcttctaatgac
atggaattggtgaaagacataggaaacaataaagtagaggtagtgtcaccttcttccgta
gactggtactcagtagacaaaaactttaaatacagagtgcgtcagcgcccgggtagcaaa
aaccctcttggctatgtgaagttcatcttccccaatgagcacaatgtgtacctgcatgat
actccgtcagaccatttgtttaaccagactgaacgtgggtttagccacggctgtatcaga
attgaaaagccatttgaatttgcgcagtacctccttaaggaccagaaacaatggactcct
tctacaatcaatgcagctatgcacggtgggcaagaaaagtacgtgaatcttaccgctaaa
gtgcctgtgtacattgtctacttcacttcatgggtggatgataaaggtgctgtccatttc
agggatgacatctacaatcatgaccgtgacttagagatggcctacttcaggtaa
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