Rufibacter tibetensis: DC20_18845
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Entry
DC20_18845 CDS
T04099
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rti
Rufibacter tibetensis
Brite
KEGG Orthology (KO) [BR:
rti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rti03032
]
DC20_18845
03400 DNA repair and recombination proteins [BR:
rti03400
]
DC20_18845
Enzymes [BR:
rti01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
DC20_18845
DNA replication proteins [BR:
rti03032
]
Prokaryotic type
DNA Topoisomerases
DC20_18845
DNA repair and recombination proteins [BR:
rti03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DC20_18845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DUF3791
Motif
Other DBs
NCBI-ProteinID:
ALJ00658
UniProt:
A0A0P0CAI7
LinkDB
All DBs
Position
complement(4609287..4610360)
Genome browser
AA seq
357 aa
AA seq
DB search
METQLTPHAIYADVAASAQQAGLRYFPDTKPGITRQPKGKQFEYFTAKGEPVTDEKILDR
INKLVIPPAWTDVWICPSENGHIQATGRDDKGRKQYLYHAQWKEVRSLNKFGRMIAFGNA
LPGIRKQVEKDLHLKKLEKRKILAIVVELLDNSFIRIGNKAYAKSNKSYGLTTLRDRHVK
VEGDHLKLDFVGKKGIKHEISIKDRRLARLVKQCQDIPGYDLFQYYDEDGNRQPIESGDV
NEYLKSLSTEDFTAKDFRTWGGTVLMVECLEQILDENPQIEKDKSVKEAAKMVAHELGNT
PTVCSKYYIHPEVVNLFKQNKLIDYLRKHDAKKRKENPYLSRTEEFVIKMLKEVKIS
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggaaactcaattgaccccacatgccatttacgcagacgtggctgcttctgctcagcaa
gctggtttacgctattttcctgacaccaagccaggcattacgcgccagcctaaaggaaag
caatttgagtattttaccgccaagggagaacccgtgacagatgaaaagattctggaccgg
ataaacaaattggtgataccgcccgcctggacagacgtttggatttgcccctctgagaac
ggccacatacaggctacgggccgtgatgataaaggccggaaacagtacctgtaccacgca
cagtggaaggaggtcaggagcttaaataagtttggtcgcatgattgcctttggaaatgcc
ctgccaggtatcagaaaacaggtagagaaagacctgcacctaaaaaaactggagaaacgc
aagatcctggccattgtggtggagttgctggacaactcgttcatcagaataggaaataag
gcttacgctaaatcaaataaatcatacgggcttactacgttgagggaccgtcacgtgaaa
gtagagggtgatcacctgaagctggattttgtaggtaaaaaaggaataaaacacgagatc
agcatcaaagaccggcgcctggccagattggtgaaacagtgccaggacataccggggtat
gacctttttcagtactatgatgaagatggtaaccgtcagcccattgaatctggtgatgtc
aatgagtacctgaaaagcctgagcaccgaagatttcactgccaaagatttcaggacctgg
ggaggtacggtcttgatggtagaatgcctggagcagatattggatgaaaaccctcaaata
gaaaaggacaagtctgtgaaggaggctgctaaaatggtggcccatgagttaggaaacacg
ccaacggtttgcagcaagtattacatccatccagaggtagtcaatttgtttaaacaaaac
aaattgatagactacctccggaaacatgatgccaaaaagcgaaaagaaaatccctacctt
tcccgtactgaggaatttgtgatcaaaatgctaaaggaggtaaaaatttcataa
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