Rufibacter tibetensis: DC20_20040
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Entry
DC20_20040 CDS
T04099
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rti
Rufibacter tibetensis
Brite
KEGG Orthology (KO) [BR:
rti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rti03032
]
DC20_20040
03400 DNA repair and recombination proteins [BR:
rti03400
]
DC20_20040
Enzymes [BR:
rti01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
DC20_20040
DNA replication proteins [BR:
rti03032
]
Prokaryotic type
DNA Topoisomerases
DC20_20040
DNA repair and recombination proteins [BR:
rti03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DC20_20040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
SPAR
Motif
Other DBs
NCBI-ProteinID:
ALJ00861
UniProt:
A0A0P0CG10
LinkDB
All DBs
Position
4849720..4852170
Genome browser
AA seq
816 aa
AA seq
DB search
MIKNLVIVESPAKAKTIEGYLGKDFVVKSSFGHVRDLPKDNNAIDIQNGFKPTYVVSPDK
REVIAQLKKLAKEAETVWLASDEDREGEAISWHLSEALNLTEAKTRRIVFREITKSAILN
AIENPRSIDTNLVNAQQARRVLDRLVGFELSPVLWKKIKTGLSAGRVQSVAVRVVVERER
EIEKHKAVSTFKVVAQFDAGGKRVEAELNTRFKTQAEAEDFLKRCIGASYSIESLEKKPT
KRSPAPPFTTSTLQQEASRKLSFSVAQTMQVAQRLYEAGKISYMRTDSVNLSQDAMTAAA
VEIARSFGENYVKTRQYKTKSKSAQEAHESIRPTDFAALQVSSDRNEQRLYDLIRKRAIA
SQMADAEIEKTTATITISGQPEKLVATGEVVRFEGFLKVYSESTDDEELADDDVKGMLPP
LNEGQSLALQRLQATERYSRPAPRYTEASLVKKLEEMGIGRPSTYAPTISTIQKRGYVEK
DNREGKERAYTVLTLENDQISTQKKTEMAGAEKAKLFPTDIAMVVTDFLVSHFESVIDYS
FTAKVEEEFDEIAAGKKQWDKMLDTFYTSFHQTIETSANVERSTVSGARELGVDPVSGMK
VIAKLGRFGPYVQLGEEVEGTEAKPVYASLRKGTFIESISLEQALELFKLPRIVGEFEGK
EMKAAIGRFGPYIQHNSKYYSLPKDLDPLLVTEPEAIALIEAKRKADAEKMIKTFPENPE
VTVLNGRFGPYICVGKKNVKIPKGQEPAELTLKQCLELAEATPDKPARGGFKKKAAPAAD
TPAAKKTAAKKPAAKKTTSTTKAAAKKTSSAKKKAS
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgataaagaacctagtaattgtggagtcaccggctaaggccaagaccatagaagggtac
ctggggaaggatttcgtggtgaaatccagcttcgggcacgtgcgcgacctccccaaagac
aacaatgctattgatatacagaacggctttaagcccacgtacgtggttagcccagataaa
cgagaagtaattgcccagcttaaaaaactagcaaaggaagccgaaacggtctggttagcg
tccgatgaggaccgcgaaggagaagccatatcctggcacctttcagaggctctgaacttg
acggaggctaaaacccgtcgcattgtattccgtgaaattactaagagcgccattctgaat
gctattgaaaacccgcgctctattgacaccaacctggtaaacgcccaacaggcacgccgc
gtgttagaccgcctggtgggttttgaattatcgccggtgctttggaagaaaatcaagaca
ggactttccgccggacgggtacaatcagtagcagtacgggtggtagtagagcgtgaacgg
gagattgagaagcacaaagctgtttctacttttaaagtagtagcccagtttgatgcaggt
ggcaaacgcgtggaagcggaactaaatacccgctttaaaacccaggccgaagctgaagac
tttttaaaacgctgcattggtgcctcctattctattgaaagtttagagaaaaagccaact
aaacggagccctgcccctccctttaccacgtctaccctgcagcaggaagccagccgtaag
ctatctttctctgtagcccaaaccatgcaagtggcacaacgcttgtacgaggcgggtaaa
atatcctacatgcgtactgactcggtgaacctgtcacaagatgccatgactgcggcggca
gttgagattgcgcgctcttttggcgaaaactacgtgaaaacacgtcagtacaaaactaaa
tcaaaatcagcgcaggaagctcacgaatcaatcagaccaactgatttcgctgcccttcag
gtaagctcagaccgaaacgagcaacgcttatatgacctgatcagaaaacgtgccattgcc
tcgcagatggccgatgctgagattgaaaaaaccactgccaccatcaccatcagtggccag
cctgaaaaactagttgccaccggagaagtagttcgttttgaaggtttcctgaaagtctac
agtgaatccacggatgatgaggaattagctgacgatgatgtgaagggaatgctccctccc
ctgaatgaagggcagtctctggctttacagcgcctgcaagccaccgagcgctacagccgc
ccagcccctcgctacactgaggctagtttggtgaagaaactggaggaaatgggaattggc
cgtccgtctacttacgcccctaccatctctaccatccagaagcgcggctacgtggagaaa
gacaaccgggaaggtaaggaacgggcctatacagttctgacgcttgagaacgaccaaatc
agcactcaaaagaaaactgagatggccggagccgagaaagccaagctcttccctaccgac
attgccatggtggtaactgactttttggtgtcacactttgagagcgtaattgactattct
ttcaccgcgaaagtagaggaagaatttgatgagatagctgcaggtaaaaagcagtgggat
aaaatgttagatacattttatacaagctttcatcaaactatagaaaccagtgccaatgta
gaacgctctaccgtaagcggtgcccgtgaactcggggtagatcctgtttcaggaatgaaa
gtgattgctaaattaggacgttttggaccttacgtacagttgggcgaggaagtggaagga
actgaagctaaaccggtgtatgccagtctacgcaaaggcactttcatagaatccatctcc
ctggaacaggcgttagagttattcaaattaccccgtatcgttggggagtttgaaggaaag
gaaatgaaagccgccattggtcggtttgggccttacattcagcacaacagcaagtactat
tccttgccgaaagacctggatcctttgttagtcactgaaccggaagccattgctttgata
gaagccaagcgcaaggctgatgcggaaaaaatgatcaagaccttccctgaaaacccggaa
gtaacggtcttaaatggtcgatttggcccatacatctgcgtaggcaagaagaacgtgaaa
attcctaaaggacaggaaccggcagagttgactttgaagcaatgtctggaattggcagaa
gctactcctgacaaaccagctcgtggtggttttaaaaagaaagcagccccagctgctgac
acccctgctgccaagaaaacagctgcaaaaaaaccagcagccaagaaaacgactagtacc
accaaagcagctgccaagaaaacttcttctgctaagaaaaaagccagctaa
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