Rickettsia tillamookensis: H6P87_00118
Help
Entry
H6P87_00118 CDS
T07505
Symbol
sca2_1
Name
(GenBank) Putative surface cell antigen sca2
Organism
rtl
Rickettsia tillamookensis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sca2
Autotransporter
Drf_FH1
Motif
Other DBs
NCBI-ProteinID:
QQV74583
UniProt:
A0A9E6MG86
LinkDB
All DBs
Position
complement(123853..129294)
Genome browser
AA seq
1813 aa
AA seq
DB search
MSLQNSHSKKYVLTFFMSTCLLTSSFLSTSARAASFKDLVSKTPTWEKHNSKQQQNIWKG
FTPNEKIKKWQEANLVPSFTQAQDDLGIKYKETDLSSFLDNTRHKARQARAENLLYIERV
KQQNFDTKKQEYINQGVAPTDIEAATNLGISYDPSKIDNNVEKDQKVRRAEKDKKAVIDL
YISSINRDIKYKHYVDNDIIPEMKEVKTALNMGKDDAESFIVSIRTEIMENAKGQYIADN
HIPTEKELKNRFGISRDDNRDGYIKSIRLKVMDKEKPQYIAANSIPTEKELEQKFGADKG
EATNYIASIATQKMLNKKAYYIDNNIIPTIEELKEEFKIGTIKANSYIKQITAGINANQL
LNNNDTTKPSAGGSQKKSGTKSDNWYMSNQGTNTTETSSGVPTGRKEKQSYSFDPISTFK
THFNNKESKGNLTQSQHNINRIIQQEENIEEFENLIKTDPIAALNLKVDSSYKKEAVTTI
LSDFNDDTIQKVLFSNDRGQLDFNTNIDVKNRPILKELLENSSSEEKTKFAERIKDYAMR
NISNSQFEEKARLDLIKLAASKDKSSVEKFLALQLELKNKMQSHIVKSEYILTPEIVAEI
NIELKNKGLIIDSLTKDYMIKLAKEVNKQTLNSVIKVILSDSNALNNETNKILGLAVGNN
ANNLEQTQSGIPNPPPLPLNGGIPNPPPLPLNGSMPPPPPLNSQGFISNSNNFDLNKLQA
EYPHIHSLYTQFTRNTTVQPKVPLQPTASSATSTERSEPETAYAKLYVEYRAETNLDIKT
KKTSEKANDLQSQIIKRKDDITNVIRQILTELYANQGADEKTLINLFSIATPEVEEKAKE
IFKELVQDPYMQDIIVNGKKATTSEDIIKNLFNEDSDDAAVRIVLSSCKISEDIKKPIKH
ELNQLKLIREIDNESTPFKQLEAAYKKTSMLDQDIFTNRVEELINNPNILTIAQQTTFLI
TEDTNLRKTISSDQAQAKLDDLRTAILSTIKFEELITANLPQNDFIAIVKAKDPALLQEF
LKASVVKQESSNNLDQLRLALPSFSGVSDQQVRALANKLNMSVILKALKDCSQEKAKNHT
HTGNMPPPPPPPGLAYLKDLGFTQDWIDRITKVNEDIKTPIFKTTPPKVYNFSSDIALRY
NEFALSGEKSAGYKGQYSDTDLFKKAIVESVVLEHSKNVSKINQNKEYFEKIQEAVSTKH
SSFIGPRTEIGQEIHNIYTSKFLELTKDKDFIRYAEDNIKPSKKRKDELTEAFTSADSDF
IGPRTEIGQEVHNIYTQQLTKYPEEAVKEAFNTADSDFIGPRTEIGQEVHNIYKSKLLEL
AKDKELFLFVEQLLAESTELEQKYGSDVQSEDNNQEKKVGRLDMKQFQSLFQQESEATND
ESSTKDDTQPEDSNKKSEKSDSTTALSPRLLSSNDSENDKSSDDKKSLLALRSSDEDDKG
YETDEELEESNNTTEEESKKDIVLESDDEAIDVSFKTEAIAEQDEAAQRQQVSDDTSRKV
AILVKATSTLHKPVHYNILSDRLKVAAIGAGDEEASINRGVWISGLYGINKQGTWKNIPK
YQGRTTGVTIGADAEFINSHDVIGIAYSRLESQIKYNKKLGKTAVNGHLLSIYGLKELIK
GFSLQAITSYGHNYIKNKSKSINNIIGKYQNNNLSFQTLLNYKYHTKYDLHFIPNIGFKY
DYSRAGNYKEYNVDIENLMIQKKSNQAFESSIGGKIVFKPIATVNNIVLTPSLYGNIERH
FNNKNTKVNAKVTFKGQTLQETIIIPKQPKLGYNIGSNILMSRKNINVLLEYNYYTHRKY
QSHQGLVKLKINL
NT seq
5442 nt
NT seq
+upstream
nt +downstream
nt
atgagcttacaaaattcccactcaaaaaaatatgttttaacttttttcatgtcaacatgt
ttgttgactagtagctttttaagtacaagtgctagagcggcaagctttaaagatttagtt
agtaaaaccccgacatgggaaaagcacaattcaaaacagcaacaaaatatttggaaaggt
tttactccaaatgaaaaaatcaaaaaatggcaagaagcaaacttagttcctagttttact
caagcacaagatgatctaggaataaagtataaggaaacagatttatcaagttttttagat
aatactaggcataaagcaagacaagcaagagctgaaaatttattatacatcgaaagagta
aaacaacagaactttgatacaaagaaacaagaatatattaatcaaggtgtagctcctaca
gatatagaagcagcaacaaatcttggaataagttatgaccctagcaaaatagacaataat
gtagaaaaagatcaaaaggtacgtcgtgcagaaaaagacaaaaaagcggtaatcgatcta
tatattagctcaataaacagagatattaaatacaaacattatgttgataatgatattatc
cctgaaatgaaagaagtaaagactgctcttaacatgggtaaagatgatgcagaatctttt
attgtatcaataagaactgaaattatggaaaacgcaaagggacaatatatagcggataac
catattcctacagaaaaagagttaaaaaatagatttggtatatctcgtgatgataataga
gatggctatattaagtcaataagacttaaagttatggacaaagaaaagccacaatatata
gctgctaatagtattcctacagaaaaagagctagagcagaaatttggtgctgataaaggt
gaggcaacaaactatatcgcatcaatagcaactcagaagatgcttaataaaaaagcatat
tatatagataataatattatccctacaattgaagaattaaaggaagaatttaagataggg
acaataaaagcaaattcttatataaagcaaataacagccggaataaatgcaaaccagctt
ttaaataacaatgatactactaaaccgtctgctggaggttcacaaaaaaagagcgggacc
aaaagtgataattggtatatgtcaaatcaaggtacaaatactacagaaacatcttcggga
gttcccacgggtagaaaagagaaacaatcatattcttttgatcctataagtacttttaaa
actcactttaataataaagaaagtaagggtaatttaacacaatctcaacacaatataaat
agaataatacaacaagaagaaaatattgaagaatttgaaaatcttattaaaacagatcct
atagcagcattaaatcttaaagtagatagtagttataaaaaagaagcagtaactactata
ttaagtgattttaatgatgatactattcaaaaggtattatttagcaacgataggggacaa
ttagatttcaataccaatattgacgttaagaatagacctattctaaaagaattattagaa
aatagttcttctgaagaaaaaactaaatttgctgaaagaattaaagactatgcgatgcga
aatatatctaatagtcaatttgaagaaaaggcacgattagatcttatcaaactagcagca
agtaaagataagagttcagtagaaaaatttttagctctgcaattagagttaaaaaataaa
atgcaatcacatattgtaaaaagcgaatatattttaacaccggaaatagtagcagaaata
aatatagaactaaaaaataaaggactaataatagatagtttaactaaagactatatgatt
aaactagccaaagaagtaaataaacaaacattaaattcagtaattaaagtaatattatcc
gatagtaacgcactaaacaatgaaaccaataaaattttaggattagcagtaggtaataat
gcaaataatttagaacaaacacaaagcggcattccgaacccaccccctttaccactaaat
ggtggtattccaaatccaccgcctctaccgctaaatgggagtatgccaccaccacctccc
ttaaattctcaaggctttattagcaattctaacaattttgatttaaataagttacaagca
gaatatcctcacatacattcattatatactcagtttactcgtaatactactgttcaacca
aaagtgccacttcaacctacagcttctagtgcaaccagtacagaaagaagcgagccagag
acagcttatgccaaactatatgtagaatatagagctgagactaatttagatattaaaacc
aaaaaaactagcgagaaagctaatgatttacaaagccaaataataaaaagaaaagatgac
attacaaatgttatacgtcaaatattaacagaattatacgccaaccaaggagctgacgag
aaaactcttataaatttatttagtattgcaactcctgaagtcgaagaaaaagctaaagaa
atttttaaggagcttgttcaagacccatatatgcaagatataattgtaaatggtaagaaa
gcaacaacaagcgaagacataattaaaaatcttttcaatgaagactctgatgatgcagca
gtacgtatcgtattatcatcatgtaaaatatctgaagatataaagaaacctattaaacat
gaattaaatcaattaaaattgattagagaaattgataacgaatctactccattcaaacaa
ttagaagctgcttataagaagacgagcatgcttgaccaagatatatttaccaatagagtc
gaagagttaatcaacaaccctaatatattaactatagcacaacaaactacttttttaata
acagaagatacaaacttaagaaaaacaattagttctgatcaagcacaggctaaacttgat
gatttaagaacagctattttaagcacaataaaatttgaagaattaattacagcaaattta
cctcaaaatgattttatagctatagtaaaagcaaaagatcctgcattattacaagagttt
ttaaaagcttctgttgtcaaacaagaaagtagtaataatttagatcaattaagattagct
ttaccttcattttcaggtgtgagtgatcaacaagtaagagctcttgctaataaattaaat
atgtctgtaatattaaaagctcttaaagactgctctcaagaaaaagctaaaaatcatacc
cataccggaaatatgccgccaccaccaccaccgcctggcttagcttatttaaaagattta
ggatttactcaagattggatagatagaattactaaagtaaatgaagatattaaaacacct
attttcaaaacaacacctccaaaggtttataattttagctccgatatagcactaagatat
aatgaatttgctttatcaggagaaaaatcagcaggatataaaggacaatactctgatacc
gatttgtttaaaaaagccatagtagaatcagtagtacttgaacattcaaaaaatgtatct
aaaatcaatcaaaataaagaatattttgaaaaaattcaagaagcagttagcactaagcac
tctagctttataggtcctagaactgaaataggacaagaaatacataatatttatacttct
aaatttttggagttaacaaaagataaagactttattagatatgctgaagataatattaaa
cctagcaaaaaacgtaaagatgaattaacggaggcgtttacttcagctgactctgatttt
ataggtcctagaactgaaataggacaagaagtacataatatttatacacagcaattgaca
aaatatccagaagaagcagtaaaagaggcatttaatactgctgactctgattttataggt
cctagaactgaaataggacaagaagtacataatatttataaatccaaacttttagagtta
gcaaaagataaagaattgtttctatttgttgaacaattactagcagaatctactgaacta
gaacaaaaatacggtagtgatgttcaatcagaagataataaccaggaaaagaaagtagga
cgtttagatatgaaacaattccaatcattattccaacaagaaagcgaagctacaaatgac
gaatcctcaacaaaggatgacacacaacctgaagatagcaataaaaagtcagagaaatct
gattcaacaactgctttatcaccgagattattgagttctaacgatagtgaaaatgataaa
tcatcagatgacaaaaaatcacttctagccttaagatctagtgacgaagacgataaagga
tatgaaactgatgaagaattagaagaaagtaataatacaactgaagaagaatcaaaaaaa
gatatagttttagaaagcgacgacgaagctatcgatgtgtcattcaaaactgaagcaatt
gcagaacaagatgaagcggcacagagacaacaggtatctgatgacaccagtaggaaagta
gcaatattagttaaggctacttcaactcttcacaaacctgttcactataatattttaagt
gatagattaaaggttgctgcaataggtgcaggtgatgaagaagctagtataaacagaggg
gtatggattagcggcttatacggcatcaacaaacaaggaacttggaagaatattccaaaa
tatcaaggtcgcacaaccggtgtaactatcggggctgatgctgaattcatcaatagtcat
gatgttataggaatagcttatagccgtttagaatcccaaattaaatataataaaaaacta
ggaaaaacagctgttaacggtcatcttttaagcatttacggtctaaaagaactaattaaa
ggcttctcgttacaagctataacatcttacggtcataattatattaagaacaaatctaaa
agtattaataatataattggaaaatatcaaaacaataatttaagttttcaaaccttatta
aattataaatatcatacaaaatacgatttacattttattcctaatatcggttttaaatat
gattattcaagagctggcaactataaagaatataatgtagatatagaaaacttaatgatt
caaaagaaatcaaatcaagcatttgaaagtagtattggcggtaaaatagtgtttaagcct
atagcgaccgtaaataatatagtattaacaccaagcttgtacggtaatattgagcgtcat
ttcaataataaaaatacaaaagttaatgcaaaagtgacttttaaagggcaaacattacaa
gaaacaattattataccaaaacaacctaagcttggatataatatcggtagtaatatactt
atgagcagaaaaaatataaatgttctgcttgagtataattattatactcatagaaaatat
caaagccatcaaggacttgtaaaactaaaaatcaatttgtaa
DBGET
integrated database retrieval system
