Rickettsia tillamookensis: H6P87_00228
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Entry
H6P87_00228 CDS
T07505
Symbol
hupA
Name
(GenBank) DNA-binding protein HU 1
KO
K03530
DNA-binding protein HU-beta
Organism
rtl
Rickettsia tillamookensis
Brite
KEGG Orthology (KO) [BR:
rtl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rtl03032
]
H6P87_00228 (hupA)
03036 Chromosome and associated proteins [BR:
rtl03036
]
H6P87_00228 (hupA)
03400 DNA repair and recombination proteins [BR:
rtl03400
]
H6P87_00228 (hupA)
DNA replication proteins [BR:
rtl03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
H6P87_00228 (hupA)
Chromosome and associated proteins [BR:
rtl03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
H6P87_00228 (hupA)
DNA repair and recombination proteins [BR:
rtl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
H6P87_00228 (hupA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
QQV74690
LinkDB
All DBs
Position
243236..243568
Genome browser
AA seq
110 aa
AA seq
DB search
MSTHNKKEPKKMNKTEFIAFMTDHGHNHKHASHKTLTKADAEKALNLVLDSVISAIKSHH
NINITGFGSFEIHHRKAREGRNPKTGAKMKIDAYNQPIFRAGRKMKEACN
NT seq
333 nt
NT seq
+upstream
nt +downstream
nt
atgagtacacataacaaaaaagaaccaaaaaaaatgaataaaaccgaatttatagcattt
atgaccgaccatggtcataatcataaacatgcttcacataaaacattaacaaaagctgat
gctgagaaagcacttaatttagttcttgatagtgtgattagtgctataaagagccaccat
aatattaatataacaggtttcggttcatttgaaatacatcatagaaaagcacgtgagggc
cgtaacccaaaaaccggagcaaaaatgaaaatagatgcttacaatcaacctatctttaga
gctggaagaaaaatgaaagaagcttgtaattaa
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