Rickettsia tillamookensis: H6P87_00595
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Entry
H6P87_00595 CDS
T07505
Symbol
dnaN
Name
(GenBank) Beta sliding clamp
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
rtl
Rickettsia tillamookensis
Pathway
rtl03030
DNA replication
rtl03430
Mismatch repair
rtl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rtl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H6P87_00595 (dnaN)
03430 Mismatch repair
H6P87_00595 (dnaN)
03440 Homologous recombination
H6P87_00595 (dnaN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rtl03032
]
H6P87_00595 (dnaN)
03400 DNA repair and recombination proteins [BR:
rtl03400
]
H6P87_00595 (dnaN)
Enzymes [BR:
rtl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H6P87_00595 (dnaN)
DNA replication proteins [BR:
rtl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
H6P87_00595 (dnaN)
DNA repair and recombination proteins [BR:
rtl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
H6P87_00595 (dnaN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta_2
DNA_pol3_beta
DNA_pol3_beta_3
PCNA_C
Motif
Other DBs
NCBI-ProteinID:
QQV75050
LinkDB
All DBs
Position
637868..639007
Genome browser
AA seq
379 aa
AA seq
DB search
MLKLIVETKTLVQSLGFASSVVEKRNVIPEYANIKLSAKDGNLELSSTNMDLYLSQKIAV
QVVSEGELTVSTKTLNDIVRKLPDSELTLTDLGTTGLEIKGKNCKFNLFTLPVSSFPAMD
SINPEASFKISCTDFAKIIESTKFSISLDETRYNLNGVYLHIKDKEFCSASTDGHRLSIS
WVTLEKQIKNFGVILPQKSAEEILKIVKDPKNINEDIEILLSSNKIKFICNENTIMLSKL
IDGTFPDYSAFIPESSSSKLVINRKIFADSIERIAIITVEKFRAIKLSLSRETLEISAVG
EARGNAKEVINSSQDKESFYEYNSDESLAIGFNPQYLEDVLKAVKSDLVELYFSDVSAPV
LIKFPENPKDIFVVMPVKV
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaattaatagttgaaacaaaaacgttagttcagtccctagggtttgcaagttcc
gttgttgaaaaacgtaatgtaatacctgaatatgcaaacattaaattatcagcaaaagac
ggcaatctggagcttagttctactaatatggatttgtatttaagtcaaaaaatagcagta
caagtggtaagtgaaggtgaacttaccgtttctacgaaaactctaaatgatatagtccga
aaacttccggattccgagcttacattaacagatctcggtacaacgggacttgaaatcaaa
ggaaaaaattgtaaatttaatttatttactttgccggttagttcttttcctgcaatggat
agtattaatcctgaagcaagttttaaaatttcctgcacggattttgctaaaataattgaa
tcaacaaaattttcgatttctttagatgaaactcgttataatttaaacggtgtttattta
cacataaaagacaaagagttttgttcggcaagtaccgatgggcatagactttcgatttca
tgggtaacattagaaaaacaaataaagaattttggagttatattaccgcaaaaaagtgca
gaggaaattttaaaaatagttaaagatcctaaaaatataaatgaagatatagaaatttta
ttaagtagcaataagattaaatttatatgtaacgaaaatactattatgctatcaaagctt
atagacggtactttccctgattatagtgcttttattccggaaagcagcagctcaaaatta
gtaattaatcgtaaaatatttgcagatagtatagaaaggatagcgataataaccgttgaa
aaatttagagcgataaaattatcgttatctcgtgaaaccttagagattagtgccgtcggt
gaagcaagaggtaacgcaaaagaggttattaattcttcacaagataaggaaagtttttat
gaatataatagtgatgagtctttagctataggctttaatccgcaatatttggaagatgtc
ttaaaagcagtgaaatcggatttagtagaactatatttttcagatgtttcagcaccggta
cttattaaatttcctgagaatcctaaagatatttttgtcgtcatgcctgttaaggtgtaa
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