Entry |
|
Symbol |
pcrA
|
Name |
(GenBank) ATP-dependent DNA helicase PcrA
|
KO |
|
Organism |
rtl Rickettsia tillamookensis
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:rtl00001]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
H6P87_00641 (pcrA)
03430 Mismatch repair
H6P87_00641 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:rtl03400]
H6P87_00641 (pcrA)
Enzymes [BR:rtl01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H6P87_00641 (pcrA)
DNA repair and recombination proteins [BR:rtl03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H6P87_00641 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
H6P87_00641 (pcrA)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
683791..685764
|
AA seq |
657 aa
MTGTMQNQDFIHTLNPQQQKAVLHTEGPLLLLAGAGTGKTKVLTSRIANIIHQNLASPQN
ILAVTFTNKAAKEMAERVNSLINCYGLNIGTFHSMAARILRDQIEHLNLGLNNRFTIISH
DDQLKLVKDIVKLKDIDTKKYAPKLIHIIISRWKDQGLLPSKLSASDTNLPLQRVAKLVY
EEYQKNLLISNVLDFGDLLLYNNELFIKNPEILRYYQEKYRYILIDEYQDTNVVQYLWAR
MLASLYKNICCVGDDDQSIYGWRGAEVGNILRFEKDFAGATIIKLEQNYRSTLPILAAAS
NVINNNKNRHGKTLWTDRESGEKIKIISCWSDKEEARYIAGEIDKLVREDRYNAGNIAIL
VRAGFQTRSFEEAFINSAMPYKIIGGLRFYERMEIRDVLAYIRISLNQNDNLALERIINV
PKRAIGAASLNKIRVYALERNISNFAAIKEMLEMGEIKAKSYETLKDLVTKIDNWHERFS
IDAPINVVKAILDDSGYLEMLQEEKTEEAFGRIENINEMLRAIAEFNDIHDFIEHSSLVM
ENEVLETNYGGSVTIMTLHAAKGLEFDVVFLPGWEEGVFPSQRSLDEDGEKGLEEERRIA
YVGITRAKKDLYITHAESRKIFYEIVRSYPSRFITEIPDEITIKTSSIKKYNSFYKF |
NT seq |
1974 nt +upstreamnt +downstreamnt
atgacaggtacaatgcaaaatcaagatttcatacatacattaaatccacaacagcaaaaa
gcagttcttcatactgaaggaccgcttttattgcttgcaggtgcagggacaggtaaaaca
aaagtacttacctcaagaatagctaatattattcaccaaaatttagcctcacctcaaaat
attctagccgttacttttactaataaagctgctaaagaaatggctgaaagagttaacagt
ctaattaattgctacggtcttaatataggcactttccactcaatggcagctaggatatta
cgtgaccaaattgagcatttaaatcttggtttaaataatagatttactattattagtcat
gatgatcaattaaaactagttaaagatatagtaaaactaaaagatattgatactaaaaaa
tatgctcctaaattaatacatatcataatttcgagatggaaagatcaaggattattacca
agtaaactatcagcatcagatactaatttaccgttacagagggtggcaaaacttgtatat
gaagaatatcagaaaaatttacttatttctaatgttttagattttggagatttgctactt
tataataatgagctttttattaaaaatcctgaaatattaagatattaccaggaaaaatat
cgatatattttaatcgatgaatatcaagacactaacgttgtccagtatttatgggcaaga
atgctcgcaagtttatataaaaatatttgctgtgtaggggatgatgatcaatctatctat
ggttggcgaggagcggaagtcggtaatatattacgttttgaaaaagattttgcaggtgca
acgattattaaattagagcagaattatagatcaactttgccaatacttgctgctgcttcc
aatgttattaataataataaaaaccgtcacggtaaaacgttatggacggatagggaaagc
ggtgaaaagataaaaattatctcttgttggagtgataaagaagaagcaagatatatagcc
ggcgaaatagataaattagtgagagaagaccgatataatgccggcaatattgcaatatta
gtacgagccggatttcaaacaagaagttttgaggaagcgtttataaatagtgcgatgcct
tataaaattataggcggtttacggttctatgaacgtatggaaataagagacgtgcttgct
tatatccgtatatctttaaatcaaaatgacaatctagcacttgagcgtattataaatgtg
ccgaaaagggcaataggtgccgctagcttaaataaaattagagtctatgcacttgagcga
aatatttctaatttcgcagccattaaagaaatgttagaaatgggcgagattaaagcaaaa
tcatatgaaactctaaaagatttggttactaaaatcgataattggcacgaaagatttagt
atagatgctccaataaacgtggttaaagcaatacttgatgattccggttaccttgaaatg
cttcaagaagaaaaaaccgaagaagcattcggtagaatcgaaaatattaacgaaatgctt
agagctattgctgaatttaacgatattcacgattttatcgaacattcaagcttagttatg
gaaaatgaagtgcttgaaaccaattacggtggctctgttactataatgaccctgcatgca
gctaaagggcttgagtttgacgtggtgtttttaccgggttgggaagagggggtgtttccg
tctcaaagatctctagacgaagatggtgaaaaaggcttagaagaagaacgccgcattgct
tatgtcggcattacgagagctaaaaaagacctttacattactcatgcggaaagccgaaaa
atattttatgaaatagtccgttcttacccttcaaggtttataaccgaaatccctgacgag
attacaatcaaaacctcttctataaaaaaatacaattctttttataagttttaa |