Rickettsia tillamookensis: H6P87_00678
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Entry
H6P87_00678 CDS
T07505
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rtl
Rickettsia tillamookensis
Pathway
rtl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rtl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H6P87_00678 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtl03019
]
H6P87_00678 (pnp)
03016 Transfer RNA biogenesis [BR:
rtl03016
]
H6P87_00678 (pnp)
Enzymes [BR:
rtl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
H6P87_00678 (pnp)
Messenger RNA biogenesis [BR:
rtl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
H6P87_00678 (pnp)
Transfer RNA biogenesis [BR:
rtl03016
]
Prokaryotic type
tRNA degradation factors
H6P87_00678 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
OB_RRP5_4th
KH-I_KHDC4-BBP
S1_RRP5
KH_2
KH_DUF2096_C
HypD
CSD
Motif
Other DBs
NCBI-ProteinID:
QQV75132
UniProt:
A0A9E6SQG5
LinkDB
All DBs
Position
complement(731482..733725)
Genome browser
AA seq
747 aa
AA seq
DB search
MFNEITKSVTWNGKVLELSTGKIARQADGAVTVKMGNSVLLCTAVVAKKAKEGIGFFPLT
INYREMAYAAGKIPGGFFKREGKASDREVLVSRLIDRPIRPLFHPAFVNETHVTCSVLSY
DPETPVDILAIIGASAALSLSPAPYIEIVAASKVGLINGEFVLNPTLELLKTSQLDLVVA
GTSDSVMMVESEAHLLAEEQMLEAVKFGFESFQPVIKIIKELAEEAKKPKLEMQNLYPAS
LKKEIEKLFVKEIEQAFAIKSKQERSTNLDLIPEKVLTHFVSDIENKKYSNYQIESALKS
IESDILRNEILEKNRRIDGRSTTDIRQIACEIGLLPSAHGSALFTRGETQSLVSTTFGTS
LDEQIVDSLEGEYKERFMLNYIFPPYSVNEAMPMKAPSRREVGHGKLAWRAINPILPNKV
QFPYSIRVVAETTESNGSSSMATVCGSSLALMYAGVPIKAPVAGIAMGLVKEGKKFAVLS
DILGDEDYFGDMDFKVAGTSEGITALQMDIKISGVDFKIMKVALEQARLGRLHILEQMNK
VISKPNSELSKNAPSTTTIKIDKDKIRDIIGPGGKVIKEICETSGAKIDISDDGSVSVYA
SDRDKLKVALDKIKAIAVEPEIGEIFNGTVMKVLDSGAFINYLGNKDGFVHISEISEERI
ETVSSVLKQGDIVKVKLIGFDNKGKAKLTIKNADKDKSSNNPKPKNNVNNAKENSESERR
DSSKKRAWNEDSNNDKEETITERKYFT
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacgaaataactaagagtgttacatggaacgggaaagttcttgagcttagtaca
ggtaagatagcaaggcaagctgacggagcagttacagtaaaaatgggtaattccgtttta
ttatgtacagcagtagtagctaaaaaagcaaaagaaggtatcggcttttttcctttaacg
attaattatagagaaatggcatatgctgccggtaaaatccccggaggattttttaaacgt
gagggaaaagcatcagatagagaagttttagtatctcgtttaatagatagaccaattaga
ccattatttcatccggcttttgtgaatgaaacgcatgtaacttgcagtgttctttcatat
gatcctgaaactccggtagatatacttgcaattattggtgcatcggctgcccttagccta
tcccctgctccttatatagaaatagttgctgcaagtaaagtcggtttaatcaatggtgaa
tttgttttaaatccgacacttgaattattaaaaacaagtcagcttgatttagtagttgca
ggaacatcagattcagtaatgatggttgaatcggaagctcatttactcgctgaagaacaa
atgttagaagccgtaaaatttggatttgaaagcttccagccggtaataaagataattaaa
gaactagcagaagaagctaaaaaaccaaagcttgaaatgcaaaatttatatcctgcctca
ttaaagaaagaaattgagaagttatttgtaaaagaaattgaacaagcttttgcgattaaa
tctaaacaggaacgtagtactaatttagatttaatacctgaaaaagttcttacacatttt
gtaagcgacatagaaaataaaaaatatagtaattatcaaatagaatcggctttaaaatct
attgaatcagatatattacgtaacgagattttagaaaaaaatagacgtatcgatggaaga
agtaccacggatataagacaaattgcttgtgaaataggtttattaccttctgcacacggt
tcagctttatttactagaggcgagacgcaaagcttagttagcactacattcggtactagt
ttagatgagcagatagttgacagtttagagggtgagtataaagagcgttttatgcttaat
tatatctttccgccctactctgtaaatgaagcaatgcctatgaaagcacctagtcgtcgt
gaagtcggacacggtaaactcgcatggcgtgctattaatccaatattacctaataaagta
caatttccttattctattagagtagttgctgaaactacggagtctaacggttcttcttca
atggcaactgtttgcggtagttctcttgctttaatgtatgccggcgtaccgataaaagca
ccggttgcgggtattgctatggggcttgttaaggaaggcaaaaaatttgcggtattatcc
gacattcttggagatgaagattatttcggtgatatggactttaaggttgcaggaactagt
gaagggattactgcattacaaatggatattaaaatatccggagtagattttaaaataatg
aaagtagctttagagcaagcacgactcggtcgtttgcatatacttgagcaaatgaataaa
gttattagtaaaccaaatagcgaactaagtaaaaatgctccttctactactactataaaa
atagataaggataaaattagagatattataggaccgggcggtaaagtaataaaggaaatt
tgtgaaactagcggtgctaaaatagatataagcgatgatggcagcgtttctgtttatgct
tcagatagagataagctaaaagtcgctttagataaaattaaagctattgccgttgaacct
gaaatcggtgaaatatttaacggtacggtaatgaaagtcttagattccggtgcttttatt
aattatttaggtaataaagacggctttgttcatattagtgaaatttcagaagaaagaata
gaaacggttagtagtgttttaaaacaaggcgatatagtaaaagttaagctgataggcttt
gataataaaggcaaagcaaaactaactattaaaaatgccgataaggataaatcttcaaat
aatccgaagccaaaaaataatgttaataatgctaaggaaaattcagaatctgagcgacgt
gattctagtaaaaaacgagcttggaatgaagattctaacaatgataaagaagaaacaatt
acggaacgtaagtattttacatag
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