Rickettsia tillamookensis: H6P87_01016
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Entry
H6P87_01016 CDS
T07505
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rtl
Rickettsia tillamookensis
Pathway
rtl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rtl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
H6P87_01016 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rtl03021
]
H6P87_01016 (rpoA)
03400 DNA repair and recombination proteins [BR:
rtl03400
]
H6P87_01016 (rpoA)
Enzymes [BR:
rtl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
H6P87_01016 (rpoA)
Transcription machinery [BR:
rtl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
H6P87_01016 (rpoA)
DNA repair and recombination proteins [BR:
rtl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
H6P87_01016 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
IDH
Motif
Other DBs
NCBI-ProteinID:
QQV75458
LinkDB
All DBs
Position
complement(1065598..1066620)
Genome browser
AA seq
340 aa
AA seq
DB search
MLSLSKNWNTLIKPNKVAYENFPETNNKAKIVVEPLERGFGLTLGNAMRRVLLSSLQGAA
ITSIKIPAIEHEFSSIPGVKEDVSEVILNIKGIEVKMHVAEKRIIKLKATGPCVITAGMI
ETGHDVEILNPDHVICNLAKNKQLEMELTCKVGKGYVLSTNSYEDNLPIGEIAIDALFNP
VKSVTYKVENTRVGQVTDYDKLIMFVETNGDLLPEMAVGLAARILQEQLQLFISFEEQEE
DKQVKTDALPFSPYLLKRVDELELSVRSANCLKNDNIIYIGDLVKRTESDMLRTPNFGRK
SLNEIKEILAKFNLRFGMDVPDWPPENIQELSKRYEDSYN
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgttatcgttaagtaaaaattggaatactttaataaagccgaataaagtcgcttatgaa
aattttccggaaaccaataataaagctaaaattgtagttgaacctttagaaagaggtttt
ggtttaacactcggtaatgctatgagaagagtattactttcttctttacaaggagcagct
atcacttctataaagatccctgctatagaacatgaattttcttctatacccggtgtaaaa
gaagatgtatcggaagtgattttaaacattaaaggtattgaagtaaaaatgcatgttgcg
gaaaaacgtatcatcaagttaaaagcaacaggaccttgtgttataacggccggtatgatt
gaaacaggtcatgatgtagaaatactgaatccggatcatgtaatttgtaatctagctaag
aataagcagctcgaaatggaattaacctgtaaggttggtaaaggatatgtacttagcaca
aatagttatgaggataatttacctattggtgaaatagctatagatgctttatttaaccca
gtaaagagtgttacttataaagtagaaaatactagagtaggtcaggttaccgactatgat
aaattaattatgtttgtagaaactaacggtgatttattacctgaaatggctgtaggttta
gctgcacgtattctacaagagcaattacaattatttatttcttttgaagaacaggaagaa
gataagcaagttaaaactgatgctttaccattttcaccttatttacttaagagagttgat
gaattggaattatcagttagatcggcaaattgtttgaaaaatgataatataatatatata
ggggatctagtaaaaagaacagaatccgatatgctgagaactccaaatttcggtagaaaa
tctttaaatgagattaaagaaatattggcaaaatttaatttaagattcggtatggatgta
ccggattggccaccggaaaatattcaagaattatctaaacgttatgaagattcttataat
taa
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