Rickettsia tillamookensis: H6P87_01154
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Entry
H6P87_01154 CDS
T07505
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rtl
Rickettsia tillamookensis
Pathway
rtl03030
DNA replication
rtl03430
Mismatch repair
rtl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rtl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H6P87_01154 (dnaQ)
03430 Mismatch repair
H6P87_01154 (dnaQ)
03440 Homologous recombination
H6P87_01154 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rtl03032
]
H6P87_01154 (dnaQ)
03400 DNA repair and recombination proteins [BR:
rtl03400
]
H6P87_01154 (dnaQ)
Enzymes [BR:
rtl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H6P87_01154 (dnaQ)
DNA replication proteins [BR:
rtl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
H6P87_01154 (dnaQ)
DNA repair and recombination proteins [BR:
rtl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
H6P87_01154 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
RNase_H_2
PYNP_C
Motif
Other DBs
NCBI-ProteinID:
QQV75592
LinkDB
All DBs
Position
1187916..1188638
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AA seq
240 aa
AA seq
DB search
MTILNTNKGFGMSSLREIILDTETTGLDPRQGHRIVEIGAIEMVNKVLTGRNFHFYINPE
RDMPFEAYRIHGISGEFLKDKPLFHTIADDFLEFISDSKLIIHNAPFDIKFLNHELSLLK
RAEIKLLELSNAIDTLVMARSMFPGSKYNLDALCKRFKVDNSGRQLHGALKDAALLAEVY
VELTGGRQSAFKMVDKSAGINNLATNQVNNKTEQAIIVIKPTKEELQKHKEFINKILIPA
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgacgattttaaataccaataaaggatttggaatgtcaagtttaagagaaataatttta
gataccgaaactacgggacttgacccacgacaaggtcatcgaatcgtcgaaattggtgct
attgagatggtgaataaggtattaacaggcaggaattttcatttttatattaatcctgag
cgagacatgccgtttgaggcttatagaattcatggcatatccggcgaatttttaaaagac
aagcctctatttcatacaatagccgatgattttttagaatttatttcagatagcaaactt
attattcataatgctcctttcgacattaagtttttaaatcatgaattatcattattaaag
agagccgaaatcaaacttttagaactgtccaatgctatagatactctagttatggctaga
agtatgtttccaggctcaaaatataatcttgacgcattatgtaaaagatttaaagttgat
aattcaggtaggcagcttcacggggctttgaaagatgcggcattacttgcagaagtatat
gtagaactaacgggtggtagacaatctgcttttaaaatggttgataaatctgccggaata
aataatttagcaactaatcaagtaaataacaaaacagagcaagctattattgttattaaa
cctacaaaagaagagctgcaaaaacataaagagttcataaataagattttaataccggct
taa
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