Rickettsia tillamookensis: H6P87_01324
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Entry
H6P87_01324 CDS
T07505
Name
(GenBank) hypothetical protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rtl
Rickettsia tillamookensis
Pathway
rtl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rtl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
H6P87_01324
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rtl03400
]
H6P87_01324
Enzymes [BR:
rtl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
H6P87_01324
DNA repair and recombination proteins [BR:
rtl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
H6P87_01324
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Nop
Csm1_N
Motif
Other DBs
NCBI-ProteinID:
QQV75758
LinkDB
All DBs
Position
complement(1381128..1382063)
Genome browser
AA seq
311 aa
AA seq
DB search
MNNTLKWLSAIGVEYCCYEHPPKLKVSNNTKLQLNSQVYSCEMKGLDTKFNLEKSKESVS
RGAERIINVQHPRSYKDDVDNFSSSTSIKPMPTKEAAFNMNDKIHDNITLARSLADKANN
IEELKESLLNFKGCELEKFATNTVFGDGNLEAKIMLIGEAPGSTEDLKGIPFCGESGNLL
DNMLHAIGISRKNNAYITNTVFWRPPANRQPTLEEVDICRPFVEKHIALISPKLIILVGS
TAATSLLGKNSGITKIRQEYYFYTNKYLSAPIQTTAIFHPAYLLRQPMQKRTSWYDLLKI
KEYLVSNRLLK
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgaataatacgcttaaatggttaagtgcaatcggtgttgaatattgttgctacgagcat
ccaccgaaattaaaagtgagtaataataccaagctacagttaaattcacaagtatactcc
tgtgaaatgaagggtttggatacgaagttcaacttggaaaagagcaaggagtctgtaagc
cgaggagcggagcgtataataaacgttcagcatccgaggtcttacaaagacgacgtagat
aatttttcaagttcaacgagtataaaacctatgcctacaaaagaagctgcattcaacatg
aatgataaaattcatgataatataaccttagcaagatctcttgccgataaagctaataat
atcgaagaactaaaagaatctctactaaattttaaaggttgtgaacttgagaaatttgct
actaatacggttttcggtgatggtaatttggaagctaaaattatgttaataggcgaagct
cctggaagtactgaggatttgaaaggaatacctttttgcggcgaaagcggcaatttactt
gataatatgctgcacgctatcggaatttcacggaaaaataacgcttatattactaatacg
gtattttggcgccctcccgctaatagacagccaacacttgaagaagtcgatatttgtaga
ccgtttgttgaaaaacacattgctcttattagccctaagctaattattttagtcggtagc
acagctgcaactagcttacttgggaaaaattcgggtattactaaaattagacaagaatat
tatttttataccaataaatatctatcagctcctattcaaactacggcaatcttccaccct
gcttatctactacgccaacctatgcaaaaacgcacctcatggtatgatttactcaaaatt
aaggagtatttggtgagtaatagacttcttaaataa
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