Rhodococcus triatomae: G4H71_00340
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Entry
G4H71_00340 CDS
T06846
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rtm
Rhodococcus triatomae
Pathway
rtm03030
DNA replication
rtm03410
Base excision repair
rtm03420
Nucleotide excision repair
rtm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rtm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
G4H71_00340 (polA)
03410 Base excision repair
G4H71_00340 (polA)
03420 Nucleotide excision repair
G4H71_00340 (polA)
03440 Homologous recombination
G4H71_00340 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rtm03032
]
G4H71_00340 (polA)
03400 DNA repair and recombination proteins [BR:
rtm03400
]
G4H71_00340 (polA)
Enzymes [BR:
rtm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
G4H71_00340 (polA)
DNA replication proteins [BR:
rtm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
G4H71_00340 (polA)
DNA repair and recombination proteins [BR:
rtm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
G4H71_00340 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
G4H71_00340 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
QNG21715
LinkDB
All DBs
Position
complement(70712..73468)
Genome browser
AA seq
918 aa
AA seq
DB search
MSPATTPPEPVDTLAPGDSASGAAAGDRPTLLLLDGHSLAFRAFYALPAENFKTQSGQTT
NAVYGFTSMLINLLRDENPTHVGAAFDVSRKTFRAEMFADYKANRASAPDEFRGQIDVTK
DVLGALGIPVMAIEGYEADDIIATLATQAQALGYRVLIVTGDRDSLQLVNDDVTVLYPRK
GVSDLTRFTPEAVEEKYGLTPSQYPDYAALRGDPSDNLPGIPGVGEKTASKWIREYGSLV
GLVDNVDKVRGKVGDALRENLPSVLLNRELTEMIRDVALPYTPDQLGLAQWDREKIHSLF
DDLEFKVLRDRLFATLAAPEPEAEEGFEVRGGTLAPGTVAAWLGEHAASGQRHGVAVVGS
RSPYNGDATAVAIAAPDGEGAYVSTSDLTPDDEQALGEWLADPAQPKALHEAKWAMHALR
GRGWTLGGLTSDTALAAYLVRPGQRTFALDDLSLRYLKRELRVEDTGQQQLSLLDDEDEA
DAKVAETQILSARAVLDLAAALDEELDAIESRSLLADMELPLLGVLAEMEATGIAVDGAH
LHDLQSTFASLVTDAAESAYGVIDKQINLGSPKQLQVVLFDELGMPKTKKTKTGYTTDAE
ALQGLFEKTGHPFLEHLLAHRDATRLKVTVDGLLKTVADDGRIHTTFNQTVAATGRLSST
EPNLQNIPVRTDAGRQIRDGFVVGEGFETLLTADYSQIEMRIMAHVSGDEGLIEAFNTGE
DLHSFVGARAFGVPIEEVTPELRRRVKAMSYGLAYGLSAFGLAAQLKISTEEAREQMDAY
FSRFGGVRDYLREVVEKARKDGYTETLYGRRRYLPDLNSDNRQRREVAERAALNAPIQGT
AADIIKVAMINVRKALVSAELRSRMLLQVHDELVLEVAPGEREQVEKLLRDEMSSAIELS
VPLEVSVGTGRSWDAAAH
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
gtgagccccgcaaccacgccccccgaacctgtcgacactctcgcccccggtgactccgct
tccggtgccgccgcaggcgaccggccgacgctgctgctcctggacgggcactcgttggcg
ttccgggcgttctacgcgttgcccgcggagaacttcaagacacagagtgggcagacgacc
aacgcggtctacggcttcacctcgatgctcatcaatctgctgcgcgacgagaatccgacc
catgtcggtgcggccttcgacgtctcgcgcaagaccttccgcgccgagatgttcgccgac
tacaaggcgaatcgcgccagcgcgcccgacgagttccgcggccagatcgacgtcacgaag
gacgtgctcggcgcgctcggcatcccggtcatggcgatcgagggctacgaggccgacgac
atcatcgccacgctggccactcaggcgcaggccctcgggtaccgcgtcctcatcgtcacc
ggcgatcgtgattcgctccagctggtcaacgacgacgtcaccgtgttgtacccgcgcaag
ggggtgtcggacctgaccaggttcactcccgaggccgtcgaggagaagtacgggctgacc
ccgtcgcagtacccggactacgcggccctccggggtgatccgtcggacaacctgccgggt
attcccggggtgggggagaagacggcgagcaagtggattcgtgagtacggctcgctcgtg
gggctcgtcgacaacgtggacaaggtgcggggcaaggtcggcgacgcgctgcgcgagaac
ctcccgagcgtgctgctcaaccgggaactcaccgagatgatccgtgacgtggctctgccg
tacacgccggatcagctcggcctcgcccagtgggaccgggagaagatccactcgctgttc
gacgacctcgagttcaaggtgctgcgtgaccggctgttcgcgaccctcgcagccccggaa
ccggaggcggaggaagggttcgaggtgcgtggtggcaccctcgcacccggcaccgtcgcc
gcatggctgggcgagcacgcggccagtgggcaacggcacggcgtcgcggtcgtgggttcg
cgttcgccctacaacggcgatgccaccgcggtcgcgatcgcggcccccgacggtgaaggc
gcctacgtctccacctcggacctgactccggacgacgagcaagccctcggtgagtggctc
gccgatcccgcgcagccgaaggcgctgcacgaggcgaagtgggcgatgcacgcgctgcgc
ggccggggctggaccttgggtgggctcaccagcgacacggctctcgcggcgtatctggtg
cggccgggccagcgcacgttcgcgctcgacgacctgtcgctgcgctacctcaaacgtgaa
ctccgcgtggaggacacggggcagcagcagctgtcgctgctggacgacgaggacgaggcg
gacgcgaaggtcgccgagacccagatcctctcggcccgggcggttctcgatctcgccgcg
gccctggacgaggaactcgacgccatcgagtcccgatcgctgctcgccgacatggagctt
cccctcctcggggtgctcgccgagatggaggccaccggaatcgccgtcgacggagcgcac
ctgcacgatctgcagagcaccttcgcgtcgctggtgaccgatgccgcggagtcggcctac
ggcgtgatcgacaagcagatcaacctcggctcgccgaagcagctgcaggtcgtgctgttc
gacgaactcggcatgccgaagacgaagaagaccaagaccggctacacgacggacgccgag
gcgctccaggggttgttcgagaagacggggcaccccttcctcgaacacctgctggcacac
cgagatgccacgcgcctgaaggtgaccgtggacgggctgctcaagaccgtcgccgatgac
ggccggatccacaccacgttcaaccagacggtcgcggcgacgggacggctgtcgtcgacc
gagccgaacctgcagaacatccccgtgcgcaccgatgccggccgccagatccgggacggg
ttcgtcgtcggcgaggggttcgagacactcctcaccgccgactacagccagatcgagatg
cggatcatggcccacgtgtccggcgacgaggggctgatcgaggcgttcaacacgggagag
gacctgcacagcttcgtcggtgcccgcgccttcggtgttcccatcgaggaggtcaccccg
gagctgcggcgacgggtgaaggcgatgtcgtacggcctcgcgtacgggctgagcgccttc
ggcctcgcggcgcagctcaagatctcgaccgaagaggcgcgcgagcagatggacgcctac
ttctcccgcttcggtggggtgcgcgactatcttcgtgaggtggtcgagaaggcccgcaag
gacggctacaccgagaccctctacggccgccggcgctatctgccggatctcaacagcgac
aaccgtcagcgccgggaagtcgccgagcgggccgcgctcaacgcgccgatccagggcacc
gcggccgacatcatcaaggtggcgatgatcaacgtgcgcaaggcactggtctcagcggaa
ctgcgttcgcggatgctgctccaggtccacgacgaattggtgctcgaggtggcccccggg
gagcgggagcaggtggagaagctgctgcgggacgagatgtcctcggccatcgagctctcg
gtgccgctcgaggtctcggtcgggaccggacggagttgggacgccgccgcgcactga
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