Rhodococcus triatomae: G4H71_01035
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Entry
G4H71_01035 CDS
T06846
Name
(GenBank) DEDD exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rtm
Rhodococcus triatomae
Pathway
rtm03030
DNA replication
rtm03430
Mismatch repair
rtm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rtm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
G4H71_01035
03430 Mismatch repair
G4H71_01035
03440 Homologous recombination
G4H71_01035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rtm03032
]
G4H71_01035
03400 DNA repair and recombination proteins [BR:
rtm03400
]
G4H71_01035
Enzymes [BR:
rtm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
G4H71_01035
DNA replication proteins [BR:
rtm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
G4H71_01035
DNA repair and recombination proteins [BR:
rtm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
G4H71_01035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
DEDDh_C
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QNG21829
LinkDB
All DBs
Position
223292..225037
Genome browser
AA seq
581 aa
AA seq
DB search
MTASPRQLTFDELETPLSETTFVIVDLETTGTNPSEDAITEIGAVKVRGGVVLGEMATLV
DPGRHLPPHIVRITGITTAMLVGAPRIESVLPTFLEFAEGAVLVAHNAPFDTGFLRAAAA
RTDTAWPRFTVLCTVKLARRVLTRDEAPSVKLAHLARLFAVDSTPTHRALDDARATVEVL
HALIERVGNQGVHSLTELVDYLPDVSTHQRAKRSFASALPQAPGVYLFRGPSEEVLYVGT
ASDLRRRVRTYFTGSETRGRIKEMVALATRVDHVECVHALEAGVRELRLLAAHTPPYNRR
SKYPMRGWWIILTDEPFPRLSIVRRPAEHCLGPFRTRSVAADVADTLAQACGIRTCTTRI
RRGGEHGPACPPREVGACPAQDIHDESDYGRSPDLVRALWRGNTDEPLRALRARMEALGL
TELFETAARLRDRTAELTRALARMQRLSAFAAIDQLVLARPREGGGWDFAVIRSGRLAAA
GIAARGTPPMPVVEQLVLGAETVVPDGTPLRGASPEEAALLLRWAESDGCRIVSASQPWA
SPIRGAGSWREWTARATAAHVTAGDHSAGDPADATTYGTHR
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgcgagcccccgtcaactgactttcgacgagttggagacgccgctgtcggagaca
accttcgtgatcgtcgatctggagaccacggggacgaacccctcggaggacgcgatcacc
gagatcggtgccgtgaaggtccgcggcggcgtcgtcctcggcgagatggcgacgctcgtc
gatcccggtcggcatcttcccccgcacatcgtgcggatcacggggatcaccaccgcgatg
ctcgtcggggcgcctcgcatcgaatcggtcctgccgacgttcctcgaattcgccgaggga
gcggtcctcgtcgcgcacaacgccccgttcgacaccgggttcctgcgcgccgccgcagcc
aggacggacaccgcctggccgcgcttcaccgtgctgtgcacggtcaagctcgcccggcgg
gtcctcacccgcgacgaggctccttccgtcaagctcgcccacctcgcccgcctgttcgcg
gtcgacagcaccccgacccaccgggccctcgacgacgcccgcgccaccgtcgaggtgctg
cacgcactcatcgagcgagtcggcaaccagggagtgcacagcctcaccgaactggtcgac
tacctccccgacgtctcgacccaccagcgagccaaacggtccttcgcgagcgcgcttccg
caggcgcccggcgtctacctcttccgcggcccgtccgaggaggtcctctacgtcgggacc
gcgtcggacctgcgccgacgggtgcgcacctacttcaccggttcggagacccggggccgg
atcaaggaaatggtcgccctggccacccgcgtcgaccacgtcgagtgcgtgcacgccctc
gaggcgggggtccgcgagcttcgcctgctcgccgcccacactccgccctacaaccgccgg
tccaagtacccgatgcgtggttggtggatcatcctcaccgacgagccgtttcctcgtctg
tcgatcgtgcgccgcccggccgaacactgtctcggcccgttccgtacccgctccgtcgcg
gcggacgtggccgacacgctcgcccaggcgtgcggcatccgcacctgcacgacgcggata
cgtcgtggcggcgaacacgggccggcgtgcccgccccgcgaggtgggggcatgccccgcg
caggacatccacgacgagtcggactacggccggtcaccggacctcgtccgcgccctgtgg
cgcgggaacaccgacgagcccctgcgtgctctgcgggcccggatggaggccctgggactg
acggagttgttcgagacggcggcccgtctgcgcgaccggacagccgagttgactcgggcc
ctcgccaggatgcagcgcctgagcgccttcgccgcgatcgaccaactcgtcctcgcgcga
ccgcgggaagggggcggttgggacttcgccgtgatccgctccggccgcctggccgccgcg
gggatcgcggcacgcggcacgccaccgatgccggtagtcgaacaactcgttctcggagcg
gaaaccgtcgtcccggacggcacgccgctgcggggtgcctcacccgaggaggcggcgctg
ctgctgcgctgggcagagtcggacggatgtcgcatcgtgtcggcgtcccagccgtgggcg
tcgccgatccgcggagccggatcctggcgggaatggacggcgcgcgcgacagccgcgcac
gtcacggccggcgaccactcggcgggcgacccggccgatgcgaccacctacggcacgcac
cgatga
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