Rhodococcus triatomae: G4H71_03840
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Entry
G4H71_03840 CDS
T06846
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rtm
Rhodococcus triatomae
Pathway
rtm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rtm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
G4H71_03840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rtm03400
]
G4H71_03840
Enzymes [BR:
rtm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
G4H71_03840
DNA repair and recombination proteins [BR:
rtm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
G4H71_03840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QNG22279
LinkDB
All DBs
Position
821795..822550
Genome browser
AA seq
251 aa
AA seq
DB search
MGRPRTGVTGYPDIAALDADLIECRACPRLVRWREQVAAEKRAAFRDWTYWGRPVPGFGP
TDASLVIVGLAPAAHGANRTGRMFTGDRSGDFLYAALYEVGLANQPTAARLGDGLELFGT
RITSPVHCAPPANKPTPAERDTCRHWLVSELDLLLPTLRTIVVLGGFGWQALLPVLAGAG
WTIPTPRPKFGHGTHVVLEGPTPLHLYGCYHVSQQNTFTGRLTPAMLEDLLRTAGRTAGI
LPDGHPARRPS
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgggccgaccgaggaccggcgtgaccgggtacccggacatcgccgcgctcgatgccgac
ctgatcgagtgccgcgcatgtcctcgtctcgtgcggtggcgggagcaggtcgcggccgag
aagcgcgccgcgttccgggactggacgtactggggccggccggtacccggtttcggcccg
accgatgcgtcgctggtgatcgtcgggctcgcgccggccgcacacggcgccaaccgcacc
ggtcgcatgttcaccggcgaccgcagcggcgacttcctgtatgccgccctgtacgaggtg
ggactcgcgaaccagcccactgccgcccggctcggcgacggcctcgaattgttcggcacc
cggatcacctcaccggtgcactgcgccccgcccgccaacaaacccacccccgccgagcgg
gacacctgccgccactggctggtgtccgaactcgacctgctcctgccgacgctccgcacc
atcgtcgtactcggcggcttcggctggcaggccctgctcccggttctcgccggtgcgggc
tggacgatcccgacaccacgaccgaagttcggacacggcacacacgtcgtcctggaaggc
cctacgccgctccacctgtacggctgctaccacgtgagccagcagaacaccttcaccggc
cgcctgaccccggccatgctcgaggacctgctgcgcaccgccgggcgtaccgccggaatc
cttccggacggtcacccggcccggaggccctcgtag
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