Rhodococcus triatomae: G4H71_05405
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Entry
G4H71_05405 CDS
T06846
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
rtm
Rhodococcus triatomae
Pathway
rtm00020
Citrate cycle (TCA cycle)
rtm00640
Propanoate metabolism
rtm00660
C5-Branched dibasic acid metabolism
rtm00720
Other carbon fixation pathways
rtm01100
Metabolic pathways
rtm01110
Biosynthesis of secondary metabolites
rtm01120
Microbial metabolism in diverse environments
rtm01200
Carbon metabolism
Module
rtm_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rtm_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
rtm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
G4H71_05405 (sucD)
00640 Propanoate metabolism
G4H71_05405 (sucD)
00660 C5-Branched dibasic acid metabolism
G4H71_05405 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
G4H71_05405 (sucD)
Enzymes [BR:
rtm01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
G4H71_05405 (sucD)
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Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
QNG22544
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All DBs
Position
complement(1149105..1150007)
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AA seq
300 aa
AA seq
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MSIFLNKDSKVIVQGITGGEGTKHTALMLKAGTQVVGGVNARKAGTTVAHTAKDGSDVEL
PVFGGVAEAIEKTGADVSIVFVPPKFAKDAMIEAIDAEIGLLVVITEGIPVQDSAYAWAY
NVDKGNKTRIIGPNCPGIITPGESLVGITPANISGTGPIGLVSKSGTLTYQMMFELRDFG
FSTAIGIGGDPVIGTTHIDAIEAFEKDPETKLIVMIGEIGGDAEERAADYIKANVSKPVV
GYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKDALEAAGVKVGKTPSETAALAREILQSL
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgtctatctttttgaacaaggacagcaaggtcatcgtccagggcatcaccggcggcgag
ggcaccaagcacacggcgctcatgctcaaggccggcactcaggtcgtcggtggcgtcaac
gcccgtaaggccggtaccaccgtcgcgcacaccgccaaggacggctcggacgtcgagctc
cccgtcttcggcggcgtcgcggaggccatcgagaagaccggcgcggacgtgtcgatcgtc
ttcgttccgccgaagttcgcgaaggacgcgatgatcgaggcgatcgacgccgagatcggt
ctgctcgtcgtcatcaccgagggcatcccggtgcaggacagcgcatacgcgtgggcgtac
aacgtggacaagggcaacaagacccggatcatcggcccgaactgccccggcatcatcacc
ccgggtgagtcgctggtgggcatcacgcccgcgaacatctccggtaccggcccgatcggt
ctcgtctcgaagtccggcaccctgacctaccagatgatgttcgagctgcgggacttcggc
ttctccaccgcgatcggcatcggtggcgacccggtcatcggcaccacccacatcgacgcc
atcgaggcgttcgagaaggatcccgagaccaagctcatcgtcatgatcggcgagatcggt
ggcgacgccgaggagcgcgcggccgactacatcaaggccaacgtctccaagccggtcgtc
ggctacgtcgcgggtttcaccgcgccggagggcaagacgatgggccatgcgggcgccatc
gtgtccggttcctcgggtaccgcacaggcgaagaaggacgcgctcgaggcggccggtgtg
aaggtcggcaagacgccgtccgagaccgccgctctggcacgggagatcctgcagagcctc
tga
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