Rhodococcus triatomae: G4H71_07355
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Entry
G4H71_07355 CDS
T06846
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
rtm
Rhodococcus triatomae
Pathway
rtm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rtm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
G4H71_07355 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rtm03400
]
G4H71_07355 (recD)
Enzymes [BR:
rtm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
G4H71_07355 (recD)
DNA repair and recombination proteins [BR:
rtm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
G4H71_07355 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
RecD_N
Viral_helicase1
UvrD-helicase
Helicase_RecD
SH3_13
AAA_22
TraI_hel_assoc_N
UvrD_C
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
QNG22879
LinkDB
All DBs
Position
complement(1547567..1549441)
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AA seq
624 aa
AA seq
DB search
MTEPLIAQRGTGLLRVFNDAGVLSAADVHVAERLRKLGGETAEHVTFAAALAVRAVRSGS
VCLDVRRMREVTVEEATEEELAALPWPDADEVVAALRVSPLVLGGGTGPLRPLRMVDTDE
GELLYLDRYFVQEQTIRRVLDTRAQDAPSLDVDLLARGLDEYFRAPGGGPSQAPDRQRIA
AALAVSRWTTVVAGGPGTGKTHTVARVLALVSAQFDRPPRIGLAAPTGKAAARLQEAVDD
QAPALGLPDGMKAMTLHRLLGWQRGGTRFRYNPANRLPFDVVVVDETSMVSLTMMCRLLE
AMRPDARLILVGDPDQLTSVDAGAVLADLVARPVRGGDDAVLRRVVGADLEATSDPDEAA
LGRSELQRLRGGVVRLSRGRRFGGAIARLAVAVRDGRDDDVMALLRADDPTVSLCAPEDL
AELHSDVVDASVAVTAAADAGDALAALSGLEAHRLLCAHREGPFGVQRWALQAQEWVAQA
QGRRLDPDSWYPGQPLLVTANDHELRVYNGDAGVIVARPDGSLAAAFPRGDDALLLHPSQ
LSEVQTVYAMTIHRSQGSQYDTVSVVLPEEGASLLTRELLYTAITRARRHVRIIGTEESV
RAGVRRQVLRASGLRREVRPFPAS
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgaaccactgatcgcgcagcgcggcaccggcctgctccgagtgttcaacgacgcc
ggggtgctgtcggccgcggacgtgcacgtggccgagcggctgcgcaagctcggcggcgag
accgccgaacacgtcacgttcgcggccgcactcgcggtgcgggcggtgcgctccggatcc
gtctgcctggatgtgcggcgcatgcgcgaggtcaccgtcgaggaggccaccgaggaggaa
ctcgcggcgctgccctggcccgatgccgacgaggtcgtcgcggcgctgcgcgtcagcccg
ctggtgctcggcggcgggaccggaccgctacggccgttgcgcatggtggacaccgacgag
ggtgaactgctctacctcgaccggtatttcgtccaggaacagaccatccgccgagtcctc
gacacgcgtgcgcaggacgccccctcgctcgacgtcgacctgctggcccgcggactcgac
gagtacttccgtgcgccgggaggcgggccgtcgcaggcaccggatcgtcagcggatcgcg
gccgcgctcgccgtctcgcggtggacgacggtggttgccggcgggccgggaaccggcaag
acccacaccgtcgcgcgggtcctggcgctggtatccgcgcagttcgacaggccaccgcgg
atcggactggccgcacccaccggcaaggccgccgcgcgcctgcaggaagccgtcgacgac
caggccccggcgctgggactcccggacggcatgaaggcgatgaccctgcaccgtctgctc
gggtggcagcgtggcggcacccggttccggtacaacccggccaacaggttgcccttcgac
gtcgtcgtggtcgacgagacgtcgatggtgtcgttgacgatgatgtgcaggctgctcgag
gcgatgcgtccggacgcccggttgatcctcgtcggcgacccggatcaattgacctccgtg
gacgcaggcgccgtgctggcggatctggtggccaggccggtccgcggtggcgacgacgcg
gtgctgcgtcgagtcgtcggcgccgatctcgaggcgacgtccgaccccgacgaggcggca
ctgggccgctccgagctccagcggctgcgcggtggtgtcgtccggctcagccggggccgc
aggttcgggggcgccatcgcccgcttggccgtcgcggtgcgggacggccgcgacgacgac
gtgatggcattgctgcgcgcggacgacccgaccgtatccctgtgcgcgccggaagatctc
gcggagttgcacagcgacgtggtggacgcgtcggtggcggtgaccgcggctgccgatgca
ggcgacgcgctcgcggccctctccggtctcgaggcgcaccggctgttgtgcgcgcaccgg
gagggcccgttcggtgtgcagcgctgggccctgcaggcgcaggaatgggtcgcgcaggcg
cagggacgccgtctcgatccggacagttggtatccgggccaacccctgctggtgacagcc
aacgaccacgaactgcgggtctacaacggcgatgcgggtgtgatcgtggcccgccccgac
gggtcgctcgcggccgcgttcccgcggggcgacgatgcgctgctgttgcacccgagccag
ctgtccgaggtgcagaccgtctacgccatgaccatccaccgaagtcagggcagccagtac
gacacggtgtccgtggtcctgccggaggagggtgcgtcgctcctcacccgggaactgctc
tacaccgcgatcacccgggcgcgcaggcacgtgcgcatcatcggcaccgaggaatcggtg
cgggccggtgtccgccgtcaggtgctgcgggcatcaggcctgcgccgggaggtgcgtccc
ttcccggcgtcgtga
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