Rhodococcus triatomae: G4H71_08065
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Entry
G4H71_08065 CDS
T06846
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rtm
Rhodococcus triatomae
Brite
KEGG Orthology (KO) [BR:
rtm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rtm03032
]
G4H71_08065 (topA)
03400 DNA repair and recombination proteins [BR:
rtm03400
]
G4H71_08065 (topA)
Enzymes [BR:
rtm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
G4H71_08065 (topA)
DNA replication proteins [BR:
rtm03032
]
Prokaryotic type
DNA Topoisomerases
G4H71_08065 (topA)
DNA repair and recombination proteins [BR:
rtm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
G4H71_08065 (topA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QNG22998
LinkDB
All DBs
Position
complement(1724196..1727114)
Genome browser
AA seq
972 aa
AA seq
DB search
MAKGDNGSAQGTAGASAQRRRLVIVESPTKARKIAPYLGKNYVVEASVGHIRDLPRGAAD
VPAKYKGEPWARLGVDVDHDFEPLYVVSPDKKGKVTELKSLLKDADELFLATDPDREGEA
IAWHLLETLKPKIPVRRMVFHEITEPAIRAAAEDTRDLDSDLVDAQETRRILDRLYGYEV
SPVLWKKVMPKLSAGRVQSVATRVIVRRERERMAFRSASYWDIAATLDAGADASPRTFGA
RLVSVDGSRVAVGRDFGPDGKLKTDTVAVLDEARARRLAESLAGVDLEVVSAENKPYTRK
PYPPFMTSTLQQEAGRKLRFTSERTMRIAQRLYENGYITYMRTDSTTLSQSAISAARAQA
TELYGAEFVHGSPRQYTRKVKNAQEAHEAIRPAGDVFATPGQLHAKLDTDEFKLYELIWQ
RTVASQMADARGNTLTLRIAGQAGTGEECVFSSSGRTITFAGFLKAYVESVDEEAGGQSD
DAESRLPVLSEGQAVTATKLDPDGHSTNPPARYTEASLIKTLEELGIGRPSTYSSIIKTI
LDRGYVYKRGSALVPSWVAFAVVGLLEAHFGRLVDFDFTAAMEDDLDEIAGGRERRGDWL
SSFYFGGDHGAEGSVARSGGLKKMVGTNLEDIDARVINSIRLFDDAEGREVHVRVGRFGP
YLERMVRNPDDPDGDPISQRANLPDDLPPDELTPEYAEKLFSTPQEGRKLGVDPLTGHEI
VAKEGRFGPYVTELLPEPEPTPPAPTAEPDVVPIPAEGTTATKAPAKKAAKKATKKAAGP
KPRTGSLFKSMDLSTVTLDDALKLLSLPRVVGVDPASNEEITAQNGRYGPYLKKGTDSRS
LATEDQIFDITLDEALKIYAEPKRRGRQAAATPPLRELGVDPVSEKPMVIKDGRFGPYVT
DGETNASLRKGDEVHSITDARASELLADRRARGPVKKKATKKAPAKKAAKKTAAKKAPAK
KAAAKKATKKSS
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaagggagacaacggcagcgcgcagggcaccgcgggagcttccgcgcagcggcgt
cgcctggtgatcgtcgagtcgccgaccaaggcgcgcaagattgcgccctacctgggcaag
aactacgtggtcgaggcgtcggtggggcacattcgcgatctgccgcgcggggccgcggac
gtaccggccaagtacaagggcgagccgtgggcgcgtctcggcgtggacgtcgaccacgac
ttcgagccgctgtacgtcgtcagcccggacaagaagggcaaggtcaccgagctcaagagc
ctcctcaaggacgccgacgaactcttcctcgccaccgaccccgaccgtgagggcgaggcc
atcgcctggcacctgctcgaaacgctcaagccgaagatcccggtgcgccggatggtcttc
cacgagatcaccgaacctgccatccgtgccgccgccgaggacacccgcgatctcgacagc
gacctcgtcgacgcgcaggagacccgtcgcatcctcgaccgtctctacgggtacgaggtc
agcccggtgctgtggaagaaggtcatgccgaagctgtcggcgggccgagtgcagtccgtg
gcgacccgtgtcatcgtccggcgcgagcgcgagcggatggcgttccggtcggcgtcctac
tgggacatcgcggccaccctggacgccggtgccgacgccagcccacggacgttcggcgcc
cggctggtcagcgtcgacggctcgcgtgtcgcggtcggccgtgacttcggtcccgacggc
aagctcaagaccgacacggtcgcggtactcgacgaggcccgtgcccgccgtctggccgag
tcgctcgccggcgtcgacctcgaggtcgtctccgccgagaacaagccgtacacgcgcaag
ccgtacccgccgttcatgacgtcgacgctgcagcaggaggccggccgcaagcttcggttc
acctcggagcgcaccatgcggatcgcgcagcggctgtacgagaacggctacatcacgtac
atgcgtacggactcgaccacgctgtcgcagtcggcgatctcggcggcccgcgcgcaggcc
accgagctgtacggcgccgagttcgtccacggctcgccccgccagtacacccgcaaggtc
aagaacgcgcaggaggcgcacgaggcgatccgccccgccggtgacgtcttcgcgacaccg
gggcagttgcacgccaaactcgataccgacgagttcaagctctacgagctgatctggcag
cgcaccgtcgcctcgcagatggcggacgcgcgcggcaacaccctcacgctgcgtatcgcg
gggcaggccggtaccggcgaggagtgcgtgttctcctcctcgggccgcaccatcaccttc
gcgggcttcctcaaggcatacgtcgagagcgtcgacgaggaggccggcggccagtccgac
gacgccgagtcccggctcccggtcctctccgagggccaggccgtcacggcgacgaagctc
gatccggacgggcactccaccaacccgccggcacgctacaccgaggccagcctgatcaag
accctcgaagagctgggcatcggccgtccttcgacgtactcgtcgatcatcaagaccatc
ctggaccggggatacgtctacaagcggggcagtgcactggtcccgtcgtgggtggcgttc
gcggtcgtggggctgctcgaggcgcacttcggtcggctggtcgatttcgacttcaccgcc
gcgatggaggacgacctcgacgagatcgccggcggccgtgagcgccgtggcgactggctg
agcagcttctacttcggcggcgaccacggcgccgaaggatcggtggcgcgctcgggtggc
ctgaagaagatggtcggcaccaacctcgaggacatcgacgcccgggtgatcaattcgatc
cgtctcttcgacgacgccgagggccgcgaggtgcacgtgcgggtcggacgcttcggcccc
tacctcgaacgaatggtgcgcaacccggacgacccggacggcgacccgatctcgcagcgc
gcgaacctgccggacgatctgccgccggacgagctgacgccggagtacgcggagaagctg
ttctccaccccgcaggaaggccgcaagctgggggtggacccgctcaccggtcacgagatc
gtggcgaaggaggggcggttcggcccgtacgtcaccgaactcctgcccgagcccgagccg
acaccgcccgcgcccacagcggagccggacgtggtgccgattccggcagagggaacgacc
gcgacgaaggcccccgcgaagaaggccgccaagaaggcgaccaagaaggcagccgggccc
aaaccccggacggggtcactgttcaagtcgatggacctgtccaccgtcacgctcgacgat
gcgctcaagctgctgtcactgccccgcgtcgtcggcgtcgatccggcgtcgaacgaggag
atcaccgcccagaacggtcgctacggcccgtatctgaagaagggcaccgactcgcgctcg
ctcgccaccgaggaccagatcttcgacatcaccttggacgaagcgctgaagatctatgcc
gagcccaagcgtcgcggccgtcaggccgcggccaccccgccgctgcgcgagctcggcgtg
gatccggtcagcgagaagccgatggtgatcaaggacggccgattcggcccgtacgtcacg
gacggtgagaccaacgcgagcctgcgcaagggcgacgaggtgcactcgatcaccgatgcg
cgcgcttccgaactgctcgccgatcggcgagctcgcggtccggtgaagaagaaggcgacc
aagaaggcaccggccaagaaggcggcgaagaagacggcagccaagaaggcgccggcgaag
aaggcagcggccaagaaggcgaccaagaagtcgtcgtga
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