Rhodococcus triatomae: G4H71_08225
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Entry
G4H71_08225 CDS
T06846
Name
(GenBank) Crp/Fnr family transcriptional regulator
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
rtm
Rhodococcus triatomae
Pathway
rtm02020
Two-component system
rtm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rtm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
G4H71_08225
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
G4H71_08225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtm03000
]
G4H71_08225
Transcription factors [BR:
rtm03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
G4H71_08225
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
GntR
Sigma70_r4
Sigma70_r4_2
MarR_2
HTH_23
HTH_29
HTH_Cmi2_C
wHTH-PRTase_assc
HTH_24
HTH_28
HTH_3
HTH_31
HTH_IclR
DUF134
DUF977
MarR
Motif
Other DBs
NCBI-ProteinID:
QNG23022
LinkDB
All DBs
Position
1757327..1758001
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AA seq
224 aa
AA seq
DB search
MDDVLARAGIFQGVEPSAVAALTKQLQPVDFPRGHVIFNEGEPGDRLYIIVSGKVKIGRR
SPDGRENLLTIMGPSDMFGELSIFDPGPRTSTATTVTEVRAVSMDREALKQWIDHRPEIA
EQLLRVLARRLRRTNNNLADLIFTDVPGRVAKALLQLAQRFGTQEAGALRVTHDLTQEEI
AQLVGASRETVNKALADFAHRGWLRLEGKSVLISDSERLARRAR
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
gtggacgacgtcctggcaagagccggcatcttccaaggagtcgagccctcagcggtagcg
gcgctgaccaagcagctgcagcccgtcgacttcccccgcggacatgtcatcttcaacgag
ggtgaacccggcgaccgcctgtacatcatcgtgtccggcaaggtgaagatcggacgccgt
tccccggacggccgggagaacctgctcacgatcatgggcccgtccgacatgttcggcgaa
ctgtcgatcttcgatcccgggccgcgtacctccaccgccaccacggtcaccgaggtgcgt
gccgtgagcatggaccgcgaggcgctcaagcagtggatcgaccaccgccccgagatcgcc
gagcagttgctgcgtgtcctcgcgcgtcgtctgcgccgcaccaacaacaacctggcggac
ctcatcttcaccgacgtccccggccgcgtcgccaaggccctgctgcagctggcgcagcgc
ttcggcacccaggaggcgggcgcactgcgcgtcacgcacgatctgacgcaggaagagatc
gcccagctcgtcggcgcctcccgcgagacggtcaacaaggcgctcgccgacttcgcccac
cgcggctggctgcggctcgagggcaagagcgtgctgatctcggactccgagcgtctggcc
cgccgcgcccgctga
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