Rhodococcus triatomae: G4H71_18075
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Entry
G4H71_18075 CDS
T06846
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rtm
Rhodococcus triatomae
Pathway
rtm03420
Nucleotide excision repair
rtm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rtm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
G4H71_18075
03430 Mismatch repair
G4H71_18075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rtm03400
]
G4H71_18075
Enzymes [BR:
rtm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G4H71_18075
DNA repair and recombination proteins [BR:
rtm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
G4H71_18075
MMR (mismatch excision repair)
Other MMR factors
G4H71_18075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QNG24699
LinkDB
All DBs
Position
3800422..3803745
Genome browser
AA seq
1107 aa
AA seq
DB search
MSTGAFEPRIDPVELAAGLGQHPPTPEQAAVIAAPLRPTLVVAGAGAGKTETMAARVVWL
VANGLVAPDALLGLTFTRKAAQQLTVRIRQRLARLAGSELLRSVDPGGELRSRILASEPE
VSTYHAYAGRLLADHGLLLPIEPTATLLSETELWQIAHRVVSSWDGDIDTDRTPASLTEA
VLALYGQLAEHLAGPEDLREAHTDLEKLVFALPPGPRQRREPGKSLLDVVEAQRRRIELL
PLVARLTETLRREGALDFGSQMSLAARLADEHPGVGDSERQRFRVVLLDEYQDTGHSQRV
LLSALFGGGADSALSVTAVGDPMQSIYGWRGASAANLPRFATDFPLADGTPAPTLELLTS
WRNPPEALDLANHVSAPLRRSGVAVSTLRPRPGAEPGDVRLALLTDADRERQWVASAVAG
EFERAREAAEPMPTAAVLVRRNADAAPMAEALRARGLPVEVVGLGGLLHTPEVADVVAML
RVVADPMAGSAAVRLLTGARWQIGAADLRALARRAGELEISRGYGTSGAVTDPESLAEAL
GSALPGEVAEQAGLADALADPGSRERYSQAGFARITALASELASLRERIGQPLTELVAEV
ERVLAVGVEVCARGGAAGREHLDAFADVVAGYAGRSTATLSGLLAFLAAAESVEDGLAPG
EVQVDPDRVQILTVHSAKGLEWEVVAVPHVTAGVFPSGTASGTWLGALGELPPALRGDRV
PPGAADGDGFPTLDLDDVADRKDLEQAIERHKAALAGRRREEDRRLFYVALTRTERVLLV
SGHHWAETGTEPKGPSEFLVELHEHAARTPDCPVRVDEWAPPPDEGAENPLTSAPVTASW
PPDPLGARREAVETGARLVRAALSAVTGADSGRARGTAEADDPENWAADVDALLRERQER
SRVESEVVLPAQLSVSQLVELKADPDAFAARLRRPLPYPPNPLARRGTAFHAWVEARFGA
VRLLDFDELPGAADTDDGSDDDLEGLQQAFLRSRWAHRTPVEVEVPFETAVGGAVLRGRI
DAVFADPDGGWTVVDWKTGAPPSTPDEPAVVMQLAAYRLAWAELMGAPPEKVRAAFHYVR
SGRTMAPGHLPGAEALAELVSGRGGPV
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgggagcattcgagccgaggatcgacccggtggaactcgccgccggactcggg
cagcatccgccgaccccggagcaggccgcggtgatcgcggcgccgttgcgcccgacgctc
gtcgtcgcgggcgcaggtgcgggaaagaccgagaccatggcagcccgcgtggtctggttg
gtggccaacgggctcgtcgccccggatgccttactcggcctgacgttcacccggaaggcc
gcgcagcagctgaccgttcggatccggcagcggctggcccggctggcggggtccgaactg
ctccgctcggtcgatccggggggcgaactgcgctcccggattctcgcgagcgagcccgag
gtgagtacctatcacgcgtacgccggccgcctgctcgccgaccacggcctcctgttgccg
atcgagccgaccgcgacgttgttgtcggagacggagctgtggcagatcgcgcaccgggtc
gtcagttcctgggacggggacatcgacaccgaccgcaccccggcgtcgctcaccgaggcg
gtgctcgcgctctacggccagctggccgagcatctcgccggacccgaggatctgcgcgag
gcacacacggatctcgagaagctcgtcttcgcgctgccccccggtcctcgtcagcgccgc
gagccgggcaagtccctcctcgacgtcgtcgaggcgcagcgcaggcgcatcgagctgctt
ccgttggtcgcccggctgaccgagacgctgcgtagggagggtgccctcgacttcggcagc
cagatgtccctcgcggcccgcctcgccgacgagcatcccggagtcggagacagtgagcgt
caacggttccgggtggtgttgctcgacgaataccaggacaccgggcactcgcagcgggtt
ctgctctcggcactgttcggcgggggagcggactcggcgctgtcggtgacggcggtagga
gacccgatgcagtcgatctacggctggcgaggtgcctccgcggccaatctcccgcgattc
gcgacggacttcccgctggccgacggtacgcccgcgcccaccctcgagctcctcaccagc
tggcggaacccgcccgaggcgctggatctggccaatcacgtgtccgcgcccctgcgccgg
tcgggtgtcgcggtcagcacactgcggccgcggcccggagcggagccgggtgatgtgcgc
ctggccctcctcaccgacgccgaccgggagcggcagtgggtggcgagcgcggtcgccggc
gaattcgagcgcgcacgggaggcagcggagccgatgccgaccgcggcggtgctggtgcgc
cgcaacgcggatgcggcgccgatggcggaggcgctgcgtgcccgggggctgcccgtcgag
gtcgtcggactgggcggcctgttgcacaccccggaagtcgccgacgtggtggcgatgctc
cgtgtcgtcgccgatccgatggccgggagtgcggccgtgcgattgctgaccggagcccgg
tggcagatcggtgccgccgacctgcgggcgctcgcgcgccgcgccggcgaactcgaaatc
tcccgtgggtacgggacatcgggcgccgtgaccgatccggagtcgctcgccgaggcgctg
ggcagtgcgctccccggagaggtcgccgagcaggcggggctcgccgatgcgctggccgac
cccggctcgcgcgagcgctactcccaggccggcttcgctcggatcacggcgctcgcgagc
gaactggcgtccctacgggaacgtatcgggcaacctctcaccgaactggtggcagaggtg
gagcgggtgctcgcggtcggtgtcgaggtgtgtgcccggggcggagccgccggtcgagag
catctggacgcgttcgcggacgtggtggccggatacgccgggcgatccaccgcaacgctg
tcgggcttgctcgccttcctcgccgcagcggagtccgtcgaggacgggctggcccccggc
gaggtccaggtggacccggaccgggtgcagattctcaccgtgcactcggcgaaggggctc
gagtgggaggtggtggcggtcccacacgtgaccgcgggagtgttcccctccggcacggca
tccgggacgtggctgggtgcactcggcgagttgcctccggcactgcgcggcgaccgggta
cctcccggcgccgcggacggcgacgggttcccgaccctcgacctcgacgacgtcgccgac
cgcaaggatctcgagcaggcgatcgaacggcacaaggccgcgctcgccggccgccgtcgc
gaagaggaccgacgactgttctacgtcgcgctcacccgcacggaacgggttctgctcgtg
tccgggcaccactgggccgagaccggcaccgaacccaaggggccgtccgagttcctcgtc
gaactgcacgagcacgccgcgcgcacgccggactgcccggtacgcgtggacgagtgggcg
ccgccaccggacgagggagcggagaatccgctgacctccgcccccgtgacggcgagctgg
ccgccggatcccctgggtgcccgccgcgaggccgtcgaaacgggtgcgcggctggtgcgc
gcggcgctgagcgcggtcaccggagctgattcagggcgcgctcgaggcacagcggaagcc
gatgacccggagaactgggcagcagacgtggacgcactgctgcgcgagcggcaggagcgg
tcccgtgtggaatcggaagttgttcttcccgcccaactctcggtcagtcagctcgtcgag
ctgaaggccgacccggacgccttcgccgcgcggctccgccggccactgccgtatccgccc
aacccgctggcccggcgcggtaccgcattccacgcgtgggtggaggccaggttcggtgcg
gtccggctgctcgacttcgacgagctacccggcgccgccgacaccgacgacgggtcggat
gacgatctcgagggcctgcagcaggccttcctgcggagtcggtgggcgcaccgcacaccc
gtcgaggtggaagtgccgttcgagaccgcggtcggtggtgccgtgctgcgtggtcgaatc
gatgcggtgttcgccgacccggacggcggatggaccgtcgtcgactggaagaccggcgca
ccgccgtccactcccgacgagcccgccgtggtcatgcaactggccgcctaccggctcgcc
tgggcggaactgatgggcgcgccacccgagaaggttcgtgccgcattccattacgtccgc
tccgggcggacgatggcgccgggtcatcttcccggcgcagaagctctcgccgaactcgtc
agtggccgtggtggcccggtgtag
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