Rhodococcus triatomae: G4H71_19480
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Entry
G4H71_19480 CDS
T06846
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rtm
Rhodococcus triatomae
Pathway
rtm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rtm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G4H71_19480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtm03019
]
G4H71_19480
03016 Transfer RNA biogenesis [BR:
rtm03016
]
G4H71_19480
Enzymes [BR:
rtm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
G4H71_19480
Messenger RNA biogenesis [BR:
rtm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
G4H71_19480
Transfer RNA biogenesis [BR:
rtm03016
]
Prokaryotic type
tRNA degradation factors
G4H71_19480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH_2
KhpA-B_KH
Motif
Other DBs
NCBI-ProteinID:
QNG24935
LinkDB
All DBs
Position
4096238..4098520
Genome browser
AA seq
760 aa
AA seq
DB search
MTENAVVEIDEGVYEATAVIDNGSFGTRTLRFETGRLAQQAAGAVVAYLDDETMLLSATS
ASKHPKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVD
GLRNEIQVVVTVMSLDPQDLYDVVAINAASASTQIAGLPFSGPVGGVRVALITSPENPAG
QWVAFPTVEQLENAVFDMVVAGRVVAGSGADADVAIMMVEAEATDNVISLVEGGAQAPTE
AIVAEGLEAAKPFIARLCAAQSALASKAAKPTGEYPVFPAYEADAYEAVESVAGGKLAEA
LTIAGKQERDDRTDEIKGEVLVSLEEKFAGREKEIGAAFRSLTKKLVRQRILRDQFRIDG
RGITDIRSLSAEVAVIPRTHGSALFERGETQILGVTTLDMVKMAQQIDSLGPEKSKRYMH
HYNFPPYSTGETGRVGSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALSSNGST
SMGSVCASTLSLYNAGVPLKAPVAGIAMGLVSDEVDGETRYVALTDILGAEDAFGDMDFK
VAGTKDFVTALQLDTKLDGIPSQVLAGALSQAKDARTTILEVMAEAIDAPDEMSPYAPRI
TTIKVPVDKIGEVIGPKGKMINSITEETGASISIEDDGTVFVGAADGLSAQAAIDKINAI
ANPQLPKVGERFLGTVVKTTAFGAFVSLLPGRDGLVHISKLGGGKRIAKVEDVVSVGSKI
RVEIADIDNRGKISLVPVEENADSTAEAPAAEAEAAEATE
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaaatgcagtagtcgagatcgacgagggtgtctacgaagccaccgccgtcatc
gacaacgggtccttcgggacccggaccctccggttcgagaccggtcggctggcccagcag
gctgccggagcggtcgtcgcctacctggacgacgagaccatgctcctgtcggcgaccagc
gccagcaagcaccccaaggagcacttcgacttcttccccctcacggtggacgtcgaggag
cgtatgtacgccgcgggccggattcccggttcgttcttccgccgcgagggccgcccctcc
accgacgcgatcctcacctgtcgcctgatcgaccggcccctgcgcccgtcgttcgtcgac
ggactccgcaacgagatccaggtcgtcgtcacggtgatgagcctggatccgcaggatctc
tacgacgtcgtcgcgatcaacgccgcgtcggcatccacccagatcgccggcctgccgttc
tccggcccggtcggcggtgtgcgcgtcgcgctgatcacgtccccggagaacccggcgggt
cagtgggttgcgttcccgaccgtcgagcagctcgagaacgccgtgttcgacatggtcgtc
gcgggtcgagtcgtcgccggttcgggtgcggacgccgatgtcgcgatcatgatggtcgag
gccgaggccaccgacaacgtgatttccctcgtggagggtggcgcgcaggcgccgaccgag
gcgatcgtggccgagggcctcgaggcggccaagccgttcatcgcgcgtctgtgcgcggcg
cagtcggctctcgcgtcgaaggccgccaagccgaccggtgagtacccggtgttccccgcc
tacgaggccgacgcctacgaggcggtcgagtcggtggccggtggcaagctggccgaggcg
ctcaccatcgcgggcaagcaggagcgtgacgaccgcacggacgagatcaagggcgaggtg
ctcgtctccctcgaggagaagttcgccggccgcgagaaggagatcggcgcggcgttccgc
tcgctgaccaagaagctggtgcgtcagcggatcctccgtgaccagttccgcatcgacggc
cgcggcatcaccgatatccggtcgctgtccgccgaggtcgcggtcatcccgcgtacccac
ggcagcgcgctgttcgagcggggcgagacccagatcttgggcgtcaccaccctggacatg
gtcaagatggcgcagcagatcgactcgctcgggccggagaagtccaagcggtacatgcac
cactacaacttcccgccgtactcgaccggtgagaccggccgcgtcggatcgcccaagcgg
cgcgagatcggccacggtgccctcgccgagcgcgcgctcgtcccggtgctgcccagcgtc
gaggagttcccgtacgcgatccgtcaggtgtccgaggcgctcagctccaacggctcgacg
tccatgggttcggtctgtgcctcgaccctgtcgctgtacaacgccggtgttcccctcaag
gcgccggtcgcgggcatcgcgatgggactcgtctccgacgaggtcgacggagagacccgc
tacgtggccctcaccgacatcctcggtgccgaggacgcgttcggggacatggacttcaag
gtcgccgggaccaaggacttcgtcaccgcgctgcagttggacaccaagctcgacggtatc
ccctcgcaggtgctcgcgggagcgttgtcgcaggccaaggatgcgcgcaccacgattctc
gaggtcatggccgaggccatcgacgcacccgacgagatgagcccgtacgcaccgcggatc
accacgatcaaggttcccgtcgacaagatcggtgaggtcatcggccccaagggcaagatg
atcaactcgatcaccgaggagaccggcgcgagcatctccatcgaggacgacggcaccgtg
ttcgtcggtgccgcggacggcctgtccgcgcaggcggcgatcgacaagatcaacgccatc
gcgaacccgcagttgccgaaggtgggcgagcggttcctcggcacggtcgtcaagacgacc
gcgttcggtgcgttcgtgtcgttgctgcccggtcgtgacggattggtgcacatcagcaag
ctcggcggcggcaagcgcatcgccaaggtcgaggacgtggtgagcgtcggatccaagatc
cgcgtggagatcgccgatatcgacaaccgcggcaagatctccctcgtcccggtcgaggag
aacgcggattccaccgcggaggctcccgctgccgaggcggaggctgcggaagctaccgag
tag
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