Rhodococcus triatomae: G4H71_20040
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Entry
G4H71_20040 CDS
T06846
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
rtm
Rhodococcus triatomae
Brite
KEGG Orthology (KO) [BR:
rtm00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
G4H71_20040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rtm03021
]
G4H71_20040
Transcription machinery [BR:
rtm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
G4H71_20040
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HC2
HTH_20
Mo25
Motif
Other DBs
NCBI-ProteinID:
QNG25032
LinkDB
All DBs
Position
complement(4218404..4219747)
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AA seq
447 aa
AA seq
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MAATDTRQTAESASQTEPEGPAAEAADGSAPAKKAPAKKAAKKAPAKKAARKAPAKKAAA
KKAAGKAGTKKPGDAEDGDAEVDIEDIEVTEGDLAATEVVEVETAEEVEEPSEKDKASGD
FVWDEEESEALRQARKDAELTASADSVRAYLKQIGKVALLNAEEEVELAKRIEAGLYATQ
LMQELAEKGEKLPAAQRRDMSWICRDGNRAKNHLLEANLRLVVSLAKRYTGRGMAFLDLI
QEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLGR
IQRELLQDLGREPTPEELAKEMDITPEKVLEIQQYAREPISLDQTIGDEGDSQLGDFIED
SEAVVAVDAVSFTLLQDQLQSVLDTLSEREAGVVRLRFGLTDGQPRTLDEIGQVYGVTRE
RIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
gtggcagccaccgatacacgtcagactgctgaatctgcttcgcagacggaaccggaagga
cccgccgccgaggcggccgacggctccgctccggccaagaaggcacctgccaagaaggcc
gcgaagaaggcacctgccaagaaggctgcccgcaaggctccggccaagaaggcagcggcg
aagaaggccgcgggcaaggccggcacgaagaagccgggcgatgccgaggacggcgacgcc
gaagtcgacatcgaggacatcgaggtcaccgagggcgacctcgccgcgaccgaggtcgtc
gaggtcgagaccgccgaggaggtcgaggagccgtccgagaaggacaaggcttccggcgac
ttcgtctgggacgaggaagagtccgaggccctgcggcaggcccgcaaggatgccgaactc
accgcatccgcggactcggtgcgggcatacctcaagcagatcggcaaggtcgcgctgctc
aacgcggaagaggaggtcgagctcgcgaaacggatcgaggccggtctctatgccacgcag
ttgatgcaggaactcgccgagaagggcgagaagctgcccgccgcgcagcgccgcgacatg
tcctggatctgccgcgacggtaaccgcgcgaagaaccacctcctcgaggccaacctgcga
ttggtcgtctcgctggccaagcggtacacggggcgtgggatggcgttcctggacctgatc
caggagggcaacctcggcctgatccgtgcagtcgagaagttcgactacacgaagggctac
aagttctccacctacgccacgtggtggatccgccaggccatcacgcgcgccatggccgac
caggcccgcaccatccgcattcccgtgcacatggtcgaggtcatcaacaagctcggccgc
atccagcgtgagctgctccaggacctcggccgcgagccgactccggaggaactcgcgaag
gaaatggacatcacgcccgagaaggtgctggagatccagcagtacgcgcgtgaacccatc
tcgctcgaccagacgatcggcgacgagggcgacagccagctcggcgacttcatcgaggat
tcggaagcggtcgtcgcggtcgacgcggtgtcgttcaccctgctgcaggatcagctccag
tcggtgctcgacaccctctccgagcgcgaggccggcgtcgtgcggctgcgcttcggcctc
accgacggccagccccgcacgctggacgagatcggccaggtgtacggcgtcacccgcgag
cgcatccgtcagatcgagtcgaagacgatgtccaagctccggcacccgtcgcggtcccag
gtactgcgcgactacctggactga
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