Rhodococcus triatomae: G4H71_20465
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Entry
G4H71_20465 CDS
T06846
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
rtm
Rhodococcus triatomae
Brite
KEGG Orthology (KO) [BR:
rtm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rtm03016
]
G4H71_20465
Enzymes [BR:
rtm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
G4H71_20465
Transfer RNA biogenesis [BR:
rtm03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
G4H71_20465
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
QNG25101
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All DBs
Position
complement(4310719..4311981)
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AA seq
420 aa
AA seq
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MHDPTTAPDSPAESATTTEPTAVPLLAPRDGVPDVVATPEAVRRAAAALAGGTGPLSVDA
ERASGFRYSARAYLIQLRREGAGTVLLDPIPVAGQLAPLAEAINPLEWVLHSADQDLPGL
AEVGLRPSVLFDTELAGRLAGFERVGLAAIVERTLGFELRKGHGAADWSKRPLPEAWLNY
AALDVELLVELRAAMVDELRAQDKLEWAREEFEHIRLAGPPKPKPDRWRRTSHVTTLKST
RQLAAVRALWQAREDIARKRDISPSRILPDSAIIDAAGKDPRSIEALRALPVFGGPRQRR
YSRVWLGALESARTLDESELPPRTPPITGPPQASRWARTDPEAAERLTAARAALADLSEA
VAVPVENLVSPELVRRLCWDWDPGSEDAAAVVDQVLAAGGARGWQRTLAGPVLAKVLADH
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcacgaccccacgaccgcgcccgactcccccgcggagtccgccaccacgaccgagccc
accgccgtcccactgctggcgccccgcgacggggtgcccgacgtcgtcgcgacgccggag
gcggtccgcagggccgccgcggcactcgccggaggaaccggaccgctgtccgtcgacgcg
gaacgcgcgtccggattccgctactccgcgcgggcgtacctgatccagctgcgccgcgag
ggcgccggaaccgtgctgctcgatccgatcccggtggccgggcaactggcgccgctcgcg
gaggcgatcaacccgctcgaatgggtgctgcactcggcagatcaggacctgccgggactc
gccgaggtcggcttgcgcccgtcggtcctgttcgacaccgagctcgccggacgcctcgcc
gggttcgagcgggtcggcctcgccgcgatcgtggagcgcactctcggattcgaattgcgc
aaggggcacggtgccgcggactggtcgaaacggccactgcccgaggcgtggctcaactac
gccgcgctggacgtcgaactcctcgtcgagttgcgggccgccatggtcgacgaactacgg
gcgcaggacaaactcgagtgggcgcgcgaggagttcgagcacatccggctcgccggacca
ccgaagccgaagccggaccgctggcgccggacatcacacgtcacgacactcaaatcgacc
cgccagctggccgcggtgcgggcactgtggcaggcacgggaggacatcgcccgcaagcgg
gacatctcacccagccggatcctgccggattcggcgatcatcgacgccgcaggcaaggac
cctcgcagcatcgaggcgctgcgggcgctgccggtgttcggcggcccccggcagcgccgg
tacagccgcgtctggctcggggccctcgaatccgccaggacgctggacgagtccgagctg
ccgccgcgtaccccgccgatcacgggccccccgcaggcgagccggtgggcccgtaccgac
cccgaggccgccgagcggctcactgccgcgcgcgccgctctcgccgacctgtccgaggcc
gtggccgtgccggtggagaatctcgtgagcccggaactcgtgcggcgactgtgctgggac
tgggatcctggtagcgaggacgcggcagccgtcgtcgaccaggtcctcgccgcgggaggg
gcacgcggctggcagcggacgctggccggtccggtgctggcgaaggtgctggcggaccac
taa
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