Rhodococcus triatomae: G4H71_21170
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Entry
G4H71_21170 CDS
T06846
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
rtm
Rhodococcus triatomae
Pathway
rtm03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
rtm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
G4H71_21170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rtm03400
]
G4H71_21170
DNA repair and recombination proteins [BR:
rtm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
G4H71_21170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
HC2
Mucin
Motif
Other DBs
NCBI-ProteinID:
QNG25222
LinkDB
All DBs
Position
complement(4455514..4456455)
Genome browser
AA seq
313 aa
AA seq
DB search
MRSIWKGSIAFGLVNVPVKVYSATEDHDIRFHQVHAKDGGRIKYQRVCSVDGEVVPYADI
DKAYESEDGVRVILTDEDFAELPAAEKHEIPVLEFVPNDQIDPILFEKSYYLEPDGSSPK
AYVLLATTLEDTDRTAIVHFTLRQRTRLAAMRSRDGVLVIQTLLWPDEVREVSFPSLDGA
EKPQKKELAMAGTLVESMSADFTPEDFTDEYQEQLRALLDEMIASGGKKVIATEEAAEPG
QDAEVVDLVAALQRSVEAAGGGKSESRTSAKKATRKAPARTTTTKKAPTKETGARKSPAK
KTAAKKTDERKRA
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgcggtccatctggaaaggttcgatagcgttcggtctcgtcaacgtcccggtgaaggtg
tactcggcgacggaggaccacgacatccggttccaccaggtccacgcgaaggacggcgga
cggatcaagtaccagcgcgtctgctccgtcgacggagaggtcgtcccctatgccgacatc
gacaaggcctacgagtccgaggacggggtgcgggtcatcctcaccgacgaggacttcgcc
gagctcccggctgcggagaaacacgagattccggtgctcgagttcgtcccgaacgatcag
atcgacccgatcctcttcgagaagagctactacctcgaacccgacggatcctcgccgaag
gcctacgtcctgctcgcgacgacactcgaggacaccgaccgcaccgcgatcgtgcacttc
accctgcggcagcgaacccggctcgcggcgatgcgttcccgggacggggtactggtgatc
cagactctgctgtggcccgacgaggtccgcgaggtgagcttcccgtccctcgacggtgcg
gagaagccgcagaagaaggaactcgccatggccggcactctcgtcgagagcatgtcggcg
gacttcacgccggaggacttcacggacgagtaccaggaacagctccgggcactcctcgac
gagatgatcgccagcggcggcaagaaggtcatcgcgacggaggaggccgccgaacccggc
caggacgccgaggtcgtcgacctcgtcgccgcactgcagcgcagcgtggaagccgcgggc
ggcggcaagtccgaatcacgcacgtcggcgaagaaggccacgcgcaaggcacccgcgcgc
acgacgaccacgaagaaggcgcccacgaaggagacgggagcacgcaagagcccggcgaag
aagacggccgcgaagaagaccgacgagcgcaagcgcgcgtga
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