Rhodococcus triatomae: G4H71_21830
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Entry
G4H71_21830 CDS
T06846
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
rtm
Rhodococcus triatomae
Brite
KEGG Orthology (KO) [BR:
rtm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
rtm03051
]
G4H71_21830 (pafA)
Enzymes [BR:
rtm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
G4H71_21830 (pafA)
Proteasome [BR:
rtm03051
]
Prokaryotic proteasome
Bacterial regulatory particles
G4H71_21830 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pup_ligase
DUF244
Motif
Other DBs
NCBI-ProteinID:
QNG25945
LinkDB
All DBs
Position
complement(4664967..4666310)
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AA seq
447 aa
AA seq
DB search
MGIETEFGVTCTFHGHRRLSPDEVARYLFRRVVSWGRSSNVFLRNGARLYLDVGSHPEYA
TAECDSLVQLVNHDRAGERVLEELLVDAEQRLAEEGIGGDIYLFKNNTDSAGNSYGCHEN
YLVARAGEFSRISDVLLPFLVTRQLICGAGKVLQTPKAAMFCLSQRAEHIWEGVSSATTR
SRPIINTRDEPHADAEKYRRLHVIVGDSNMAEPTTMLKVGTAALVLEMIEAGVSFRDFAL
DNPIRAIREVSHDTTGARPVRLAGGRQASALDIQREYHARAVEHLRNREPDAQVEQVVDL
WGRMLDAVEAQDFAKVDTEVDWVIKRKLFQRYQDRYDLELSDPKIAQLDLAYHDIKRGRG
VFDVLQRKGLVKRITEDETIDEAVENPPQTTRAKLRGEFIAAAQAAGRDFTVDWVHLKLN
DQAQRTVLCKDPFRSVDERVERLIASM
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgggtatcgagaccgagttcggtgtgacctgcacctttcacggtcaccgtcggctcagt
ccggacgaggtcgcacggtatctgttccgccgtgtggtgtcctggggccgcagttccaac
gtcttcctccgcaacggggcccggctgtatctcgacgtcggctcgcacccggagtatgcg
actgccgagtgcgacagcctcgtgcagctggtcaatcacgaccgcgcgggcgagcgggtc
ctggaggaactcctcgtcgacgccgagcagcggctcgctgaggaaggtatcggcggcgac
atctatctgttcaagaacaacaccgactcggccggcaattcgtacggctgccacgagaac
tacctggtggcacgcgcgggagagttctcccggatctcggacgtgctgctgccgttcctg
gtcacccgccagctcatctgcggtgccgggaaggtgctgcagacgccgaaggcggcgatg
ttctgcctgtcccagcgtgccgagcacatctgggagggtgtctcgtccgcgacgacccgg
tcgaggcccatcatcaacacccgcgacgaaccgcacgcggatgccgagaagtaccgcagg
ctgcacgtcatcgtgggcgattcgaacatggccgagcccaccacgatgctcaaggtgggg
acggcggcactggtcctcgagatgatcgaggcgggcgtgtcgttccgcgacttcgcgctc
gacaacccgatccgggcgatccgcgaggtcagccacgacaccacgggcgcccggccggtg
cggctcgccgggggtcgtcaggcgagtgccctcgacatccagcgggagtatcacgcccgc
gccgtggagcacctgcgcaatcgggaaccggacgcacaggtcgagcaggtggtggacctg
tggggacggatgctcgacgccgtggaggcccaggatttcgcgaaggtcgacaccgaggtc
gactgggtgatcaagcgcaagctcttccagcggtaccaggaccgatacgacctcgagctg
tccgatcccaagatcgcgcaactggatctggcgtatcacgacatcaagcggggccgcggc
gtcttcgacgtcctgcagcgcaagggcctggtcaagcggatcaccgaggacgagaccatc
gacgaggcggtggagaatccgccgcagaccacccgggcgaaactccggggcgagttcatc
gcggcagcgcaggccgccgggcgcgacttcaccgtggactgggtgcatctcaagctcaac
gatcaggcgcagcgcaccgtgctgtgcaaggacccgttccgatccgtggacgagcgggtc
gaacgtctgatcgcctccatgtga
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