Rathayibacter tritici: A6122_0056
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Entry
A6122_0056 CDS
T04388
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
rtn
Rathayibacter tritici
Pathway
rtn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rtn00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
A6122_0056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FlgD_ig
CBM_11
SGBP_B_XBD
Glyco_hydro_42
Cellulase
Glyco_hydro_10
Glyco_hydro_39
Phage_lipoprotein
Glyco_hydro_1
Motif
Other DBs
NCBI-ProteinID:
AND15226
UniProt:
A0A160KP83
LinkDB
All DBs
Position
60986..66253
Genome browser
AA seq
1755 aa
AA seq
DB search
MSRARTVFLVTAALVGTLLTAPSVALAATPTTALVTGFESGAPALAAATGTASTAASGDS
TEGDSSVEVSYDVTGGLAELGYDPLQAPVVPAPASALTVDLRGDGSYNTVYLRIRDASGE
TFVHRVDAMRSTQWQTLTVDLTAEPVARDGGDGNAVMDAPLTVAGVLVVRNGAQPPIGSF
ALDNLRADTTGWTLPVAASTYVAAGQSAALSFDAGAAGDWELRLADAAGLSRTLTGTVDA
AGPVALDWDGLDGSGAAMSGDVRAVLRQDDSADGSLGAATTTGVPLLVTLAAADDPAATS
VVEAFDGGDDGWGVATGSATLRRASAAAAKGGAASTQGTDALAVDYDLTDGMAGITRTAP
LDVATGPVTALKVDLKGDGSYNTVYLRVTDASGEAFTYRMDAMRQSTWTTVPIDLTQDAV
LAEGGNADSVLDMPLTLTGFYVVRNGEQSATGSFVLDNLRAVSSRWTMPVADTEFLVPSE
SALASLAFSAATAGDWMIVLRDGTGRSRSLTGTLAEPGETAVQWDGKADDGQEMDGPIRS
TFLQDSSPDGAFSASRTRSATPTLLTVAAAQPSTTSVVEGFEGAASTWGVAMGSAAISRT
SAQKTQGSFAQRIDYDVSSGLVETVQSTPATVIVKPATSLRIDLRGDGTYNTVYTRLRDA
SGETFTYRLDAMRSTAWATLDVDLTAPAALIEGGDGDQVLDFPVKLSGVIIVRNGSQPAT
GTVVLDNLRTLASGWSLPTAASSFFTPAASATTSFSFTAAGPGDYRLELRDTEGRLKTIT
GRAAAAGSVTVPWDGSDGSGARMRGDVSGVFSQDGANDGTLASNATRSGIPLLLTLAEVD
ADVSLAQSFDSAGTEWVGAAGGATLSTSTSRTEGSGALRIAYDLSQADAEIEPATTPVPL
LTQPATALKVDLLGDSSWNTVFLKLRDATGEMFFYRVDAMSLSRWTTATIDLRSPAANTH
LGNDDSVLDYPVSLVRITVVRNGPSAPATGSVVLDNLRVLDKDWTLPTASAARFSRSTAA
TTAVRFSAGSPGDYALVLRDSAGRLRTYGGTASAAGEISVTYDGTDDSGAAMSGSIAGRL
TWDTTANGALSGAATATRPYLTGVSARVTEAAPTSISGINSFLTEQDSPAEADRQAALLE
GAQVRWAREEFEWKRIEPRKGYYDWAKFDQAVAISQARNVDMIGKLVYSAPWASSAPAGT
SAEDAQYYPPSSTADFASYAAATVARYRDRVHVWEVWNEPNTDYYWRGGATAGQYGELLK
AASAAIKAVDPTATVLVGGLDQFSDPFMAGVLAAGAGDSFDGLAVHTYTVDGAPETGAIP
TYLDAAQNFLTRSAPGRSLWITEVSWATCTTCVGATSEADQASYLSRSYLDAAARGIKAI
AWYNLVGGPDPQAPLDTFAVTERSGRQKPSYAALKDVGAVLATGTAVGRASATASASPVK
VDDLSSTSGWAVAPIGGGSASLAATSTGYSGSGALTLTYDFSGSSKGAQLHTSRALPGSP
TAVSVWVRGDASTSPVYLKLQDATGETFQGLVGNVGGPAWQKMTLFSDGLNTNYTHSGGD
GDGVWDYPVKLVDAFVYRSMSGITSGTVSIDDVTADYGVNLHGTVLQTPTETVQALSTAG
PSTASVQVSGTAASIRTSSGSTALTVADGHATVTLGRTPTFVVSAPAVARPSGTTTLDWM
TGDGATTSVAVLTASGSVAKQLTTSIRYLAGRQVLAWDGRLTNGTVAPAGSYSMRITTTT
LDGRTSVQKVAFTQP
NT seq
5268 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtgcccgaaccgtcttcctcgtcaccgccgctctcgtcggaaccctgctcacg
gcgccgagcgtcgcgctggccgcgactcccaccaccgctcttgtcaccggcttcgagagc
ggtgcgccggcgctcgcggcggccacgggcacggcctccacggctgcctccggcgacagc
acggagggtgactcctccgtcgaggtctcgtacgacgtgacgggcggactcgccgagctc
ggctacgacccgctgcaggcgcccgttgtccccgcacccgcctcggccctgacggtcgat
ctccggggcgacggctcctacaacaccgtctatctgcggatccgcgacgcgagcggtgag
accttcgtgcaccgcgtggacgcgatgcgctcgacccagtggcagacgctcaccgtagac
ctcaccgcggagccggtggcccgtgacggcggcgacggcaacgccgtgatggacgcgccg
ctcaccgtcgccggcgtcctcgtggtgcgcaacggcgcgcagccgcccatcggctccttc
gccctcgacaatctgcgcgcggacaccaccggctggaccctccccgtcgccgcgtccacc
tacgtcgccgccgggcagagcgcagcgctctcgttcgacgccggcgcggcgggcgactgg
gagctgcggctcgcggacgctgccgggctctcgcgcaccctcaccggcacggtcgacgcc
gccgggcccgtcgccctcgactgggacggcctcgatggctccggcgccgcaatgagcggc
gacgtgcgcgcggtcctccgccaggacgactccgcggacggctccctcggcgccgcgacc
acgaccggtgtcccgctcctggtgaccctcgccgccgcggacgaccccgctgcgacctcg
gtggtcgaggccttcgacggcggcgacgatggttggggggtggctaccggatccgcgacg
ctgcgccgtgcctccgcggccgctgcgaagggcggggcggccagcacgcagggcactgac
gcgttggccgtcgactacgacctcaccgacggcatggccggcatcacccgcaccgcaccg
ctcgacgtcgcgaccggcccggtcaccgcgctgaaggtcgacctcaagggcgacggcagc
tacaacacggtctacctccgagtcaccgacgcgagcggcgaggcgttcacctaccgaatg
gacgcgatgcggcagagcacctggaccacggtgccgatcgacctgacccaggatgcggtg
ctcgccgagggcggcaacgccgactccgtgctcgacatgccgctgacgctgaccggcttc
tacgtcgtgcgcaacggcgagcagtcggccacgggctccttcgtgctcgacaacctgcgc
gcggtgagcagccggtggaccatgcccgtcgcggacaccgagttcctcgtgccgtcggag
agcgccctcgcgagcctcgccttctcggccgccaccgccggcgactggatgatcgtcctg
cgcgacggcaccggccgcagccgctcgctcaccggcaccctcgccgagcccggcgagacc
gccgtgcagtgggacgggaaggccgacgacggccaggagatggacggcccgatccgcagc
accttcctgcaagactccagccccgacggagcgttctctgcctcgcggacccgctccgcg
actccgaccctgctcaccgtcgccgcggctcaaccgtcgacgaccagcgtggtcgagggc
ttcgagggcgcggcgtcgacctggggagtggcgatgggctcggcggcgatctcgcgcacc
agcgcgcagaagacgcagggctccttcgcccagcggatcgactacgacgtgtcctcgggg
ctggtcgagacggtgcagagcacccccgcgaccgtgatcgtgaaaccggccacgtcgctc
cggatcgacctcaggggcgacggtacctataacaccgtctatacgcggctccgcgacgcc
tctggtgagaccttcacgtaccggctcgacgcgatgcgatcgacggcgtgggcgacgctc
gacgtcgacctcaccgctccggccgccctgatcgagggcggcgacggcgaccaggtgctc
gacttcccggtgaagctctcgggcgtcatcatcgtgcgcaacggcagtcagcccgcgacc
gggaccgtcgtgctcgacaacctgcgcaccctcgcctccggctggtccctgccgaccgcg
gcgagctcattcttcacgccggccgcctcggcgaccacctcgttctcgttcacggccgcc
ggcccgggcgactaccggctggagctgcgcgatacggagggacgcctgaagacgatcacc
gggcgcgccgcggcggccggctcggtcaccgtgccctgggacggctccgacggctccggg
gcgcggatgcggggcgacgtcagcggcgtcttctcgcaggacggcgcgaacgacggcacg
ctcgcctcgaacgcgacccgcagcgggatcccgctgctgctgaccctcgccgaggtcgac
gccgacgtgagcctcgcgcagtcgttcgactccgccgggaccgagtgggtgggggccgct
ggtggcgccaccctctccacctcgaccagccgcaccgagggctcgggggcgctgcggatc
gcctacgacctttcccaggccgacgccgagatcgagcccgcgaccactccggtaccgctg
ctgacgcaacccgcgaccgcgctcaaggtcgatctgctcggcgacagcagctggaacacc
gtgttcctgaagctgcgcgacgccaccggcgagatgttcttctaccgcgtcgacgcgatg
agcctcagccggtggacgaccgcaacgatcgacctccggtctccggccgcgaacacccac
ctcggcaatgacgacagtgtgctcgactacccggtctcgctggtgcggatcaccgtggtc
cgcaacggcccttcggccccggccactggctcggtcgtcctcgacaatctgcgcgtgctc
gacaaggactggacactgccgaccgcgagcgccgcgcgcttctcgcgctcgaccgcggcg
acgacggccgtccgcttcagcgccggcagcccgggcgactacgccctcgtgctgcgcgac
tccgccggacgccttcgcacctacggcggaaccgcctccgccgcgggcgagatcagcgtg
acctacgacgggaccgacgacagcggagccgcgatgtccggcagcatcgccgggcgcctc
acctgggacacgacagcgaacggcgcgctctcgggagccgccacggcgacccgcccgtac
ctcaccggagtgagcgcccgcgtcaccgaggcggcacccacctcgatcagcggcatcaac
agcttcctcaccgagcaggattcgcccgccgaggcggaccggcaggccgccctcctcgag
ggtgcccaggtgcgctgggcccgtgaggagttcgagtggaaacgcatcgagccgcggaag
ggctactacgactgggcgaagttcgaccaggccgtcgcgatcagccaggcgcgcaacgtc
gacatgatcggcaagctcgtctactccgcgccctgggcctcctccgccccggccggcacg
tccgccgaggacgcccagtactacccgccgagcagcaccgccgacttcgcctcctatgcg
gcggcgacggtggcccggtacagggaccgtgtgcacgtctgggaggtgtggaacgagccc
aacaccgactactactggcgcggcggagccacggccggccagtacggcgagctgctgaag
gccgcctccgcggcgatcaaggccgtcgatccgaccgcaaccgtgctggtcggcgggctc
gaccagttcagcgacccgttcatggcgggcgtgctcgcagccggagccggcgactcgttc
gacgggctcgccgtgcacacctacacggtcgacggggcgcccgagaccggagcaatcccg
acctacctcgacgcggcgcagaacttcctcacccgcagcgcgccgggccggagcctgtgg
atcaccgaggtcagctgggcgacctgcaccacttgcgtcggcgcgaccagcgaggccgac
caggcgtcgtacctctcccgctcctacctcgacgccgcggcccgcggcatcaaggcgatc
gcgtggtacaacctcgtcggcggccccgacccgcaggcgccgctggacaccttcgcggtg
accgagcgttccgggcggcagaaaccctcctacgccgcgctcaaggatgtaggcgcggtc
ctcgcgaccggcaccgctgtcggtcgggcgagcgcgaccgcctccgcctcgccggtgaag
gtcgacgacctctcctccacgagcggatgggccgtggcgccgatcggcggcgggagcgcc
tcgctcgccgccacctcgaccggctactcgggctcgggggcactgacgctgacctacgac
ttctccggtagctcgaagggcgcgcagctgcacacctcgcgcgccctccccggctcgccg
acggcggtctcggtttgggtgcgcggcgacgcgagcaccagccccgtgtacctgaagctc
caggacgcgaccggagagaccttccagggcctcgtcggcaatgtcggtggcccggcgtgg
cagaagatgaccctgttctcggacgggctgaacaccaactacacccattcgggcggagac
ggcgacggcgtgtgggactacccggtgaagctcgtggacgccttcgtctaccggtcgatg
tcgggcatcacctccggcacggtctcgatcgacgacgtgacggccgactacggagtgaac
ctgcacggcaccgtgctgcagacgccgaccgagacggtgcaggcgctctccacggccggc
ccgtcgacggcttcggtgcaggtctcgggcacagcggcatcgatccgcacgagcagcggc
agcacggcgctgacggtggccgacgggcacgcgaccgtgacgctcggccgcacgccgacg
ttcgttgtctcggcgcctgcagtggcgcgtcccagcggcacgacgacgctcgactggatg
accggcgacggcgcgacgaccagcgtcgcggtgctcacggcgtcgggctccgtggcgaag
cagttgaccacgtcgatccgctacctcgcgggccggcaggtgctcgcctgggatggacgt
ctgaccaacggcaccgtcgcgccggccgggtcgtacagcatgcgcatcacgacgaccacg
ctcgacgggcgcacgagcgtgcagaaggtggcgttcacccagccctga
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