Rathayibacter tritici: A6122_0179
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Entry
A6122_0179 CDS
T04388
Name
(GenBank) exonuclease
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rtn
Rathayibacter tritici
Pathway
rtn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rtn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A6122_0179
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rtn03400
]
A6122_0179
Enzymes [BR:
rtn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
A6122_0179
DNA repair and recombination proteins [BR:
rtn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
A6122_0179
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
AND15344
UniProt:
A0A160KQ78
LinkDB
All DBs
Position
complement(210478..211317)
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AA seq
279 aa
AA seq
DB search
MRIATWNVNSIRARTGRVVDWLVREDIDVLAMQELKCKPEQFPHEAFADAGYHVEMVGLS
QWNGVGIASRLPMEDVQIGFPGMPGFAKEPAADGSYPLEARAIGATVDGVRVWSLYVPNG
RAVDDPHYHYKLDWLAALAASAREWLAAEPDLPLALVGDWNVAPLDSDVGDPSLGPGSTH
VSVPERAAFSAFGAAGLRDVVRPLVPEGYTYWDYKQLRFPRNEGLRIDFVLGSPAFGELV
TGASIHRDERKGDAPSDHVPVVVDLDLETTLDDDRPMIF
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgccacctggaacgtgaactccatccgggcccgcaccggccgcgtcgtcgac
tggctcgtgcgcgaggacatcgacgtgctggccatgcaggagctcaagtgcaagcccgaa
cagtttccgcacgaggccttcgccgacgccggctaccacgtcgagatggttggcctcagc
cagtggaacggtgtgggcatcgcctcccgactgccgatggaagacgtacagatcgggttt
cccggcatgcccggattcgccaaggagccggcggctgacggcagctacccgctcgaggcc
cgcgcgatcggcgcgaccgtcgacggagtccgcgtctggagcctgtacgtcccgaacggc
cgcgcggtcgacgacccgcactaccactacaagctcgactggctcgcggcccttgcggcg
agcgctcgcgaatggctggccgctgagcccgatctgcccctcgcgctggtcggcgactgg
aacgtcgctccgctcgacagcgatgtcggcgacccgagcctgggccccggatccacgcac
gtctcggtccccgagcgcgcggccttctccgccttcggggccgcgggcctgcgcgacgtc
gttcgcccgctcgtccccgagggctacacctactgggactacaagcagctgcgcttcccg
cgcaacgagggtctgcggatcgacttcgtgctcggctcccccgcgttcggcgagctggtc
accggagcatcgatccaccgcgacgagcgcaagggcgacgccccgagcgaccatgtgccc
gtggtggtcgacctcgacctcgagacgaccctggacgacgaccgtccgatgatcttctga
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