Rathayibacter tritici: A6122_0610
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Entry
A6122_0610 CDS
T04388
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rtn
Rathayibacter tritici
Pathway
rtn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rtn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A6122_0610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rtn03021
]
A6122_0610
03400 DNA repair and recombination proteins [BR:
rtn03400
]
A6122_0610
Enzymes [BR:
rtn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A6122_0610
Transcription machinery [BR:
rtn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
A6122_0610
DNA repair and recombination proteins [BR:
rtn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
A6122_0610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
AMIN-like
Motif
Other DBs
NCBI-ProteinID:
AND15766
UniProt:
A0A160KQF6
LinkDB
All DBs
Position
667022..668008
Genome browser
AA seq
328 aa
AA seq
DB search
MLIAQRPTLTEENISEFRSRFVIEPLEPGFGYTLGNSMRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVREDVTEIILNIKGLVVSSEHDEPITAYLRKQGAGQVTAADISAPAGVEIHN
PELVIATLNDKAKFELELTIERGRGYVSATQNRSEFSEAGQIPVDSIYSPVLKVTYRVEA
TRAGERTDFDRLVVDVETKPAISPRDAIASAGRTLTELFGLARELNNAAEGIEIGPAPVD
AVLSTELSMPIEDLDLSVRSYNCLKREGINNVNELVALSETQLMNIRNFGQKSVDEVKEK
LTELGLSLKDSVPGFDGAHFYSYDDESI
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
gtgcttatcgcacagcgtccgacgctcaccgaggagaacatctcggagttccgttcccgc
ttcgtcatcgagcccctcgagcccggcttcggctacacgctcggcaactcgatgcgtcgc
accctgctgtcctccatccccggcgccgctgtcaccagcatccggatcgacggagtcctg
cacgagttcacgaccgtcccgggcgtccgcgaggacgtcaccgagatcatcctgaatatc
aagggactcgtcgtttcctccgagcacgacgagccgatcaccgcctacctgcgcaagcag
ggcgccggccaggtcaccgccgcggacatctcggctccggccggtgtcgagatccacaac
ccggaactcgtcatcgccacgttgaacgacaaggcgaagttcgagctggagctcacgatc
gagcgcggccggggctacgtctcagcgactcagaaccgtagcgagttctccgaggccggc
cagatcccggtcgactcgatctactcgcccgtgctgaaggtcacctaccgtgtcgaggcc
acccgcgccggcgagcgcaccgacttcgatcgcctggtcgtcgacgtggagacgaagccg
gcgatctcgccgcgcgacgccatcgcctccgccggtcgcacgctgaccgagctgttcggt
ctcgcccgcgagctgaacaacgcggccgagggcatcgagatcggccccgcgccggtcgac
gcggtcctttcgactgagctgtcgatgcccatcgaggacctcgacctctcggtgcgcagc
tacaactgcctcaagcgcgagggcatcaacaacgtcaatgagctcgtcgccctctcggag
acgcagctcatgaacatccgcaacttcggtcagaagtcggtggatgaggtcaaggagaag
ctgacggagctcggcctgtcgctcaaggactcggtccccgggttcgacggcgcccacttc
tacagctacgacgacgagagcatctag
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