Rathayibacter tritici: A6122_0962
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Entry
A6122_0962 CDS
T04388
Name
(GenBank) hypothetical protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
rtn
Rathayibacter tritici
Pathway
rtn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rtn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A6122_0962
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtn03000
]
A6122_0962
03400 DNA repair and recombination proteins [BR:
rtn03400
]
A6122_0962
Enzymes [BR:
rtn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
A6122_0962
Transcription factors [BR:
rtn03000
]
Prokaryotic type
Helix-turn-helix
AraC family
A6122_0962
DNA repair and recombination proteins [BR:
rtn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
A6122_0962
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ada_Zn_binding
AlkA_N
HTH_18
HTH_AraC
HHH
Motif
Other DBs
NCBI-ProteinID:
AND16113
UniProt:
A0A160KRN7
LinkDB
All DBs
Position
complement(1109074..1110522)
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AA seq
482 aa
AA seq
DB search
MPDSDPLFEERYRAVASRDSRFDGRFLTGVHSTGIYCRPSCPAITPQRANVRFYPTAAAA
HEAGLRACKRCLPDAVPGSPEWNLRDDTAARAMRMIGDGVVDREGVEGLAARLGYGARHL
GRILREELGAPALALARAQRAQTARLLLTGTDLPVSDVAFAAGFASIRQFNATLVEVYER
TPTALRASARGVRSGAAVHDGATTLELRLPVRAPFDAGVLDQLGARALPGLEEASPGGYA
RSLLLPAGPALVRLGVDGERVRCRATLVSVADVGPLVARIRRLLDLDADARAVDEALSAD
PALAASIAARPGMRVPGSVDPAETLVRALVGRRTVGRLVAALGETLPEAVASGSITRTFP
SPAVIAEHAGGLLRGSAEVLLRVCGLLADGSLRLDAGRDEVLEQLLAVPGIRRSTAAAVA
LRATADPDVLLTGDPAVRRGAAALGLPAGERALAEAGRRWAPWRSYAGAHLAAAVTPSAR
GR
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgactccgacccgctcttcgaggagcgataccgcgccgtcgcctcccgcgactcc
cgattcgacggccgcttcctgaccggcgtgcactccaccggcatctactgccgcccgagc
tgcccagccatcacgccgcagcgcgcgaacgtgcgcttctaccccacggcggccgcggcg
cacgaggcgggcctgcgtgcctgcaagcgctgcctacccgatgcggtgcccggctccccc
gagtggaacctccgcgacgacacggcggcgcgcgcgatgcgaatgatcggagacggcgtc
gtcgaccgggagggggtcgaggggttggccgcgcggctcggctacggggcgcggcacctc
ggccggatcctgcgcgaggagctgggcgcgcctgccctcgccctcgcccgcgcccagcgc
gcccagaccgcacggctgctgctcacgggcaccgacctgccggtgtccgacgtggcgttc
gcggccggattcgcgagcatccggcagttcaacgcgaccctcgtcgaggtgtacgagcgg
acgccgacggccctgcgcgcctcggcccgcggtgtccgctccggcgcggcggttcacgac
ggggcgacgacgctcgaactccggctcccggtgcgcgcacccttcgatgcgggagtcctc
gaccagctcggcgcccgcgcgctccccgggctggaggaggcgtcgcccggcggctacgcg
cgctcgctcctcctgcccgcaggccccgcgctggtccggctcggagtggacggggagagg
gtccgctgccgcgccacccttgtctcggtcgccgacgtcgggccgctggtggctcgcatc
cggcggctgctcgatctcgacgcggacgcgcgcgccgtggacgaggcgctctcagccgat
cccgctctcgccgcgagcatcgccgcgcgcccggggatgcgcgtacccggctccgtggat
ccggccgagaccctcgttcgcgcgctggtcggccgacgaacggtcggccgcctggtcgct
gcgctgggtgagacgcttccggaggcggtggcgagcggatccatcacgcggacgttcccc
tcccccgccgtgatcgcggaacacgccggggggctactgcgcgggtccgccgaggtcctc
ctgcgggtctgcgggctgctcgcggacggctccctccgactggacgccggcagggacgaa
gtcctcgagcagttgctggccgtcccgggcatcaggcggtcgacggccgccgcggtggcc
ctccgcgcgaccgccgatccggacgtgctgctcaccggcgaccccgcggtccggagaggg
gcggctgcgctcggcctgcccgccggggagcgcgctctggccgaggcgggccgccgctgg
gcgccgtggcgcagctacgccggggcgcacctcgcggccgcagtcactccttcggcgcgg
ggtcgatga
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