Rathayibacter tritici: A6122_1003
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Entry
A6122_1003 CDS
T04388
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
rtn
Rathayibacter tritici
Pathway
rtn00300
Lysine biosynthesis
rtn00470
D-Amino acid metabolism
rtn01100
Metabolic pathways
rtn01110
Biosynthesis of secondary metabolites
rtn01120
Microbial metabolism in diverse environments
rtn01230
Biosynthesis of amino acids
Module
rtn_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rtn00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
A6122_1003
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
A6122_1003
Enzymes [BR:
rtn01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
A6122_1003
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GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
Chap-C
Motif
Other DBs
NCBI-ProteinID:
AND16153
UniProt:
A0A160KRR9
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Position
1152517..1153398
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AA seq
293 aa
AA seq
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MTIELHFTKGQGTGNDFVLYSDPDGEVDLSPAQVAMICDRHFGVGADGVIRAVRSRAIPE
GAASLAEESEAEWFMDYRNADGSIAEMCGNGVRVYAAFLLAAGLAALEPGDTLPIGTRAG
VRDVTRSGAGFQVDLGRWELAGGEPLVRAKELSVARPGLGLDLGNPHVVVALSNDEELDS
ADLSYIPHLDPEPAAGANIEFVVPGEPLVHDGIGRIRMRVHERGSGETLSCGTGAAAAAL
AVRHWAGPRAPQSWRVEVPGGTLGVTMFAAEEGEHVGLSGPADLVFTGTIRLD
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcgagctgcacttcaccaagggccagggcacgggcaacgacttcgtgctctac
agcgacccggacggtgaggtggacctctcgcccgcgcaggtcgcgatgatctgcgaccgg
cacttcggcgtcggtgccgacggtgtcatccgagcggtccgctccagggcgatcccggag
ggtgcggcctccctcgccgaagagagcgaggcggagtggttcatggactaccgcaatgct
gacggctcgatcgcggagatgtgcggcaacggcgtccgcgtctacgcggcgttcctgctc
gctgccggactggccgccctcgagccgggcgacaccctcccgatcggcacccgcgcggga
gtgcgcgacgtgacgcgcagcggtgcaggcttccaggtcgacctcggccgctgggagctg
gcgggcggcgagcctctggtgcgggcgaaggagctgagcgtcgcgcggcccggactcgga
ctcgacctcggcaatccgcacgtcgtcgttgccctcagcaatgacgaggagctcgactcc
gccgacctctcctacatccctcacctcgaccctgagcctgccgccggagcgaacatcgag
ttcgtcgtacccggcgagcccctcgttcacgacggtatcggccggatccggatgcgcgtg
cacgagcgtggcagcggcgagaccctcagctgcggcaccggcgcggccgcggcggcactg
gcggtccggcactgggcgggaccccgcgccccgcagtcgtggcgcgtcgaggtcccgggg
ggcacgctcggcgtcaccatgttcgccgcggaggagggcgagcacgtcggcctctccggc
ccggccgatctggtcttcaccggcaccatccggctcgactga
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