Rathayibacter tritici: A6122_1130
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Entry
A6122_1130 CDS
T04388
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
rtn
Rathayibacter tritici
Pathway
rtn03030
DNA replication
rtn03430
Mismatch repair
rtn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rtn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A6122_1130
03430 Mismatch repair
A6122_1130
03440 Homologous recombination
A6122_1130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rtn03032
]
A6122_1130
03400 DNA repair and recombination proteins [BR:
rtn03400
]
A6122_1130
Enzymes [BR:
rtn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A6122_1130
DNA replication proteins [BR:
rtn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
A6122_1130
DNA repair and recombination proteins [BR:
rtn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
A6122_1130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
HROB
OB_MCM10
Motif
Other DBs
NCBI-ProteinID:
AND16278
UniProt:
A0A160KSZ2
LinkDB
All DBs
Position
1287524..1291036
Genome browser
AA seq
1170 aa
AA seq
DB search
MPSNDSFVHLHVHSEYSMLDGAARVKPLIDAAVEEGMPAIAVTDHGNVFGAFDFWRTATA
AGIKPIIGTEAYLTPGTHRSDKTRIRWGDGGGDDVSGSGAYTHMTLLSSTTTGMHNLFRL
SSRASIEGYYFKPRMDREILSQYSEGLIGTTGCPSGEVQTRLRLGQYKEARQAAADYRDI
FGAENFFAEIMDHGLDIERRVIGDVIRLAKDVGLPLVATNDLHYTHAHDATSHAALLCVQ
SGTTLDDPKRFKFDADEFYLKSPREMRQVFRDHPEACDNTLLIAERCDVQFDTSANYMPR
FPVPEGETEDTWFVKEVEAGLRERYPDGVSEEVRARADYETQVILQMGFPGYFLVVADFI
NWSKRNGIRVGPGRGSGAGSMAAYAMKITDLDPLRHGLIFERFLNPDRVSMPDFDVDFDD
RRRGEVIRYVTDKYGDERVAQIVTYGTIKAKQALKDASRVLGFPFGMGEKLTKAMPPAIM
GKDIPLSGINDPAHARYKEALDVRTVIAEDPQAKLVFDTALGLENLKRQWGVHAAGVIMS
SDPLLDIIPIMKREQDGQIVTQFDYPACESLGLIKMDFLGLRNLTIIDDALDNIRANRKQ
DLVLEDLELDDPAAYELLARGDTLGVFQLDGGPMRGLLRLMKPDNFEDISAVLALYRPGP
MGADSHTNYALRKNGVQQITPIHPELEEPLSEVLGGTYGLIVYQEQVMSIAQKLAGFTLA
QADLLRRAMGKKKKSELDKQFEGFSGGMIANGYSMEAVKTLWDILLPFSDYAFNKAHSAA
YGVVSYWTAYLKAHYPAEYMAALLTSVGDSKDKMAAYLNECRRMGIKVLPPDVNESIGFF
TAVGTDIRFGLGAVRNVGTNVVEGIRAAREEKGRFETFHDFLRKVPLQVANKRTIESLIK
AGAFDSLGSTRRALVEVHEDAVEAAVGEKRNEANGQVGFDFDSLWDEPQAAIQVPERPEW
AKRDKLAFERDMLGLYVSDHPLAGLETELAKHYSTTIADLLISETIADGETVVVAGLVTS
VQHRMAKASGNQYGMIQVEDFGGEITCMFMGKAYQEFAPALTNDSIVVVRGRVSMRDDGM
NLHAFSLFAPEMSQDGDSGPLTVSMPEPRATTDTISQLSDVLIRHSGRTEVRLKLIKGDT
ARVFEVPFPVRITPDLFGELKSLLGPNCLY
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
ttgccgagtaacgattccttcgtccacctgcacgtgcacagtgagtactcgatgctcgac
ggtgccgcgcgggtgaagccgctgatcgatgcggcggtcgaggagggcatgccggcgatc
gccgtgaccgaccacgggaacgtgttcggagccttcgacttctggcgcaccgcgacggcg
gcggggatcaagcccatcatcggcaccgaggcgtacctcactccgggcacgcaccgctcc
gacaagacgcggatccgctggggcgacgggggcggcgatgacgtgtccggctccggcgcc
tatacacacatgacgctgctcagctcgaccacgacgggcatgcacaacctcttccgcctc
tcctcgcgcgcctcgatcgagggctactacttcaaaccgcggatggaccgcgagatcctc
tcgcagtactccgaggggctgatcggcacgaccggctgcccgagcggtgaggtgcagacc
cgcctccgcctggggcagtacaaggaggcgcggcaggcggccgccgactaccgcgacatc
ttcggcgcagagaacttcttcgccgagatcatggaccacggtctcgacatcgagcggcgg
gtcatcggcgacgtcatccggctcgccaaggatgtgggcctcccgctcgtcgccactaac
gacctgcactacacccacgcgcacgacgcgacgtcgcacgccgcgctgctctgcgtgcag
tccggcacaacgctcgatgaccccaagcgtttcaagttcgacgcggacgagttctacctc
aagtcgccgcgcgagatgcgccaggtcttccgcgaccaccccgaggcctgcgacaacaca
ctcctcatcgccgagcgctgcgacgtgcagttcgacacgtccgccaactacatgccccgc
ttcccggtccccgagggcgagaccgaggacacctggttcgtgaaagaggtcgaggccgga
ctgcgcgagcgctacccggacggtgtctcggaggaggtgcgcgctcgcgccgactacgag
acgcaggtcatcctgcagatgggcttccccggttacttcctcgtcgtcgccgacttcatc
aactggtccaagcgcaacgggataagggtcggccccggccgcggttccggcgcggggtcg
atggccgcctacgcgatgaagatcaccgacctcgatccgctgcgccacggcctgatcttc
gagcggttcctcaacccggaccgcgtctcgatgcccgacttcgacgtcgacttcgacgac
cgtcgccgcggcgaggtcatccggtatgtcaccgacaagtacggtgacgagcgcgtcgcc
cagatcgtcacctacggcacgatcaaggcgaagcaggcactcaaagatgcctcacgagtc
ctcggcttcccgttcgggatgggcgagaagctgacaaaggcgatgccgcccgcgatcatg
ggcaaggacatcccgctcagcggaatcaacgaccccgcacacgcccgctacaaggaggcg
ctcgacgtccgcactgtgatcgccgaggatccgcaggccaagctggtcttcgacaccgcg
ctcggactcgagaacctcaagcgccagtggggcgtgcacgcggccggcgtcatcatgtcc
agcgatccgctgctcgacatcatcccgatcatgaagcgggagcaggacggtcagatcgtc
acgcagttcgactaccccgcgtgcgaatccctcggcctgatcaagatggacttcctgggg
ctgcggaacctcacgatcatcgacgacgccctcgacaacatccgtgcgaaccgcaagcag
gatctcgtgctggaggacctcgaactcgacgacccggcggcctacgagctgctggcccgc
ggagacaccctcggcgtgttccagctcgacggcggaccgatgcgcgggctgctgcgcctg
atgaaaccggacaacttcgaggacatctccgcggtcctcgcgctctaccgcccgggaccg
atgggcgccgactcccacaccaactacgcgctgcgcaagaacggcgtgcagcagatcacc
ccgatccaccccgagctcgaggagccgctctcggaggtgctcggtgggacgtacggcctg
atcgtgtaccaggagcaggtcatgtcgatcgcgcagaagctcgcgggcttcaccctcgcg
caggccgacctgctgcggcgcgcgatgggcaagaagaagaagtccgagctcgacaagcag
ttcgagggcttctccggcggcatgatcgccaacggctactcgatggaggccgtcaagacc
ctctgggacatcctcctgcccttctccgactacgccttcaacaaggcgcactcggcggcg
tacggagtggtgtcctactggaccgcctacctcaaggcccactaccccgctgagtacatg
gccgcgctgctcaccagcgtcggcgactccaaggacaagatggccgcctacctcaacgag
tgccggcggatggggatcaaggtgcttccgccggacgtcaacgagtcgatcggcttcttc
accgcggtcggcaccgacatccgcttcggtctcggcgccgtccgcaacgtcggaacgaac
gtggtcgaggggatccgcgccgcacgcgaggagaaggggcgattcgagacgttccacgac
ttcctccgcaaggtgccgctccaggtggcgaacaagcgcaccatcgaatcgctgatcaaa
gccggagccttcgattcgctcggctcgactcgccgcgccctcgtcgaggtgcacgaggat
gccgtcgaggccgccgtcggggagaagcgcaacgaggccaacggccaggtcggcttcgac
ttcgacagcctctgggacgagccgcaggccgcgatccaggtgcccgagcgtccggaatgg
gccaagcgggacaagctcgccttcgaacgcgacatgctcggcctgtacgtgtccgaccat
ccgctcgccgggctcgagaccgagctcgccaagcactacagcacgactatcgccgacctg
ctgatctcggagacgatcgccgacggcgagaccgtggtcgtcgctggcctcgtcacgagc
gtccaacaccggatggccaaagcctccggcaaccagtacgggatgatccaggtcgaggac
ttcggcggcgagatcacctgcatgttcatggggaaggcgtaccaggagttcgcccccgcg
ctcaccaacgactccatcgtcgttgtccgtggccgcgtcagcatgcgcgacgacgggatg
aacctgcacgcgttcagcctcttcgcccccgagatgagccaggacggcgactccgggccg
ctcaccgtctcgatgcccgagccgcgcgcgaccaccgacacgatctcgcagctcagcgac
gtactcatccgccactcgggtcggaccgaggtccgcctgaagctcatcaagggcgacacc
gcgcgcgtcttcgaggtgccgttcccggtgcggatcacgccggacctgttcggggagctg
aagagcctgctggggccgaactgtctgtactga
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