Rathayibacter tritici: A6122_1166
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Entry
A6122_1166 CDS
T04388
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
rtn
Rathayibacter tritici
Pathway
rtn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rtn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
A6122_1166
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rtn03400
]
A6122_1166
Enzymes [BR:
rtn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A6122_1166
DNA repair and recombination proteins [BR:
rtn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A6122_1166
RecFOR pathway proteins
A6122_1166
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
Mg_chelatase
TIP49
Zeta_toxin
MCM
AAA_22
AAA_14
nSTAND3
Sigma54_activ_2
AAA_3
IstB_IS21
AAA_18
AAA_33
NB-ARC
NTPase_1
Rad17
DUF815
AAA_25
AAA_24
ABC_tran
NPHP3_N
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
AND16313
UniProt:
A0A160KS47
LinkDB
All DBs
Position
1328646..1329680
Genome browser
AA seq
344 aa
AA seq
DB search
MSDDVLGAEVASEAEVAFEGALRPKNLSEFVGQRKVRGQLELLLKAAAMQGRTPDHILLA
GPPGLGKTTLAMIVAEESSSPLRLSSGPAIQHAGDLAAVLSSLLPGEILFIDEIHRMARS
AEEMLYLAMEDFRIDIMVGKGAGATSVPLDLAPFTLVGATTRSGLLPNPLRDRFGFTAHL
EFYAEDELRQVLARAARLLELDIDADAVAEIAGRCRGTPRIANRLLRRVRDFALVHGGRA
DVTAVRAALELYDVDALGLDRLDRAVMEIVLTRFDGGPVGLNTLAVSVGEEAETVEAVVE
PFLVRIGLLTRTPRGRVATADAYRHFGIDPRATAAQPPLFPDDL
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacgacgtgctcggcgccgaggtggcctcggaggcggaggtcgccttcgagggc
gccctgcggcccaagaacctgagcgagttcgtcgggcagcgcaaggtgcgcggtcagctc
gagctgctgctcaaggccgcggcgatgcaggggcgcacgcccgaccacatcctgctggcc
ggtccgcccggtctcggcaagacgacgctcgcgatgatcgtggcggaggagagctcgtcg
ccgctgcgcctgtccagcggcccggcgatccagcacgcgggcgacctcgccgctgtgctc
tcctcgttgctgcccggcgagatcctcttcatcgacgagatccatcgcatggcgcgctcc
gcggaagagatgctctacctcgcgatggaggacttccggatcgacatcatggtcggcaag
ggggcgggagccacgtccgtcccgctcgatctcgctccgttcaccctcgtcggggcgaca
acccgatcgggtctcctgcccaatccgctgcgcgaccgcttcggcttcaccgcgcatctc
gagttctacgcggaggacgagctgcgtcaggtcctcgcgcgggcggctcggctgctcgaa
ctcgacatcgatgcggatgcggtggccgagatcgccgggcgctgccggggcactccgcgc
atcgccaatcggctgctgcgccgggtgcgtgacttcgccctggtgcacggtggccgggcc
gacgtcaccgctgtccgtgcggcgctggagttgtacgacgtcgacgcgctcgggctcgac
cggctcgaccgggcggtcatggagatcgtgctgacccgcttcgacggtgggcccgtgggc
ctgaacactcttgccgtctcggtgggggaggaggccgagacggtcgaggcggtcgtcgag
ccgttcctcgtgcggatcgggctgctcacgcgcacgccgcggggccgcgtcgccactgcg
gacgcctaccgccacttcgggatcgacccccgggcaacggcggcccagccgcccctgttc
cccgatgacctatga
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