Rathayibacter tritici: A6122_1237
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Entry
A6122_1237 CDS
T04388
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
rtn
Rathayibacter tritici
Pathway
rtn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rtn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A6122_1237
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rtn03400
]
A6122_1237
DNA repair and recombination proteins [BR:
rtn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A6122_1237
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A6122_1237
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_21
RsgA_GTPase
AAA_16
nSTAND1
AAA_25
AAA_22
nSTAND3
DnaJ_CXXCXGXG
NACHT
SLFN-g3_helicase
ATPase
NB-ARC
MeaB
Viral_helicase1
NTPase_1
DUF87
Motif
Other DBs
NCBI-ProteinID:
AND16382
UniProt:
A0A160KRX4
LinkDB
All DBs
Position
1419350..1422367
Genome browser
AA seq
1005 aa
AA seq
DB search
MIESADRQGEGPADQRPANASGDVGGSAYTFGVSILNAVTDPSSTPSPSFHRFVSSLDES
TSKLVVSGARVHNLQNVDLEIPRDSMVVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSAY
ARQFLGQVDRPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEIFDYMRLLWARIGIPHC
PICSEQISAQTVQQIADQLMELESGTRYQILSPVVSQKKGEFVDLFKELTAGGYSRAMVD
GKLIQLSEPPVLKKQYKHDISVVVDRLVAGPDILGRLTDSLETALRLTDGIVQINFVDGE
GEGAWTTYSEKLSCPNNHPISLTEIEPRTFSFNAPFGACPECSGLGTRMSVDDELLLGDP
DLSIAEGVIIPWTTQGKGLFQYYEKLLDGLARDLGFALTTPWKRLSTEVQQAVLHGDNFE
VKVKWKNRYGREMSYTSGFEGVVPYIERQFVQAETDVQRTRWAEFLREVPCPVCKGSRLK
PEVLAVLVHGASIADVADLSLGDAQDFMSRLELTDREAHIAAQVLREIRARIDFLIEVGL
NYLNLSRAAASLSGGEAQRIRLATQIGSGLTGVLYVLDEPSIGLHQRDNRRLIDTLIKLR
DLGNTLIVVEHDEDTIRTADWIVDIGPGAGVNGGRVVHSGSYESLLQNTHSLTGDYVSGR
KAIEVPKKRRKIDRKRMIKVVGANANNLRKVDAEFPLGTFVAVTGVSGSGKSTLVNDILY
RVLANQLNGARKVPGKHTRVTGLENLDKVVHVDQNPIGRTPRSNPATYTGVFDRIRNLFA
ETTEAKARGYLPGRFSFNVKGGRCEACSGDGTIKIEMNFLPDVYVACEVCGGARYNRDTL
TVHYKGKNIAEVLDMPIAEAADFFEPITAIHRFLRTLVEVGLGYVRLGQSATTLSGGEAQ
RVKLATELQRRSNGRSVYVLDEPTTGLHFEDVRKLLMVLNGLVDKGNTVITIEHNLDVIK
SADWLIDMGPEGGAGGGQVVAVGTPEHVAKAEGSHTGMFLAEILG
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgagagcgctgatcggcaaggggagggaccggcggatcagcgcccagcgaacgcc
tcgggcgatgtcggtggctccgcatacactttcggagtgtcgatcctgaacgccgttacg
gacccctcctccaccccctctccctccttccaccgcttcgtctcctcgctcgacgagtcg
acgtcgaagctggtggtgagcggcgcgcgggtgcacaacctgcagaacgtcgacctcgag
atcccccgcgactcgatggtggtgttcaccggtctgtcgggctccggcaagtcgtccctc
gccttcgacacgatcttcgccgagggccagcggcgctacgtcgagtcgctctccgcctac
gcccgccagttcctcggacaggtggaccgaccagacgtcgatttcatcgagggcctcagc
cccgccgtctcgatcgaccagaagtcgacgaaccgcaacccgcgctcgaccgtcggcacg
atcaccgagatcttcgactacatgcgtctgctctgggcccgcatcggaattccgcactgc
ccgatctgcagcgagcagatctcggcgcagactgttcagcagatcgccgaccagctgatg
gaactcgagtccggcactcgctaccagatcctcagccctgtcgtctcgcagaagaagggc
gagttcgtcgacctcttcaaggagctgaccgcgggcggctattcgcgtgcgatggtcgac
gggaagctcatccagctgagtgagccgcccgtgctcaagaagcagtataagcacgacatc
tcggtcgtcgtcgaccggctcgtcgccggccccgacatcctcggacgcctcaccgactct
ctcgagacggctctgcggctcaccgacggcatcgtccagatcaacttcgtcgacggtgag
ggcgagggcgcgtggaccacctactccgagaagctgtcctgcccgaacaatcacccgatc
tcgctcaccgagatcgagccgcgcaccttttccttcaacgcgccgttcggagcctgcccc
gagtgctccggcctcggcacgcggatgtcggtcgacgacgaactgctgctcggcgacccc
gacctcagcatcgccgagggcgtcatcattccctggaccacccagggcaagggcctcttc
cagtactacgagaagctgctcgacggcctggcgcgcgacctgggcttcgcgctgaccacc
ccgtggaagcgcctcagcaccgaggtgcagcaggccgtcctccacggcgacaacttcgag
gtcaaggtcaagtggaagaaccgctacggccgcgaaatgagctacacctccggcttcgag
ggcgtcgtgccctacatcgagcgccagttcgttcaggccgagaccgacgtccagcgcacc
cgctgggccgagttcctccgtgaggtgccctgccccgtgtgcaagggctcacgcctcaag
cccgaggtgctcgccgtgctcgtgcacggcgcgagcatcgccgatgtggccgacctcagt
ctgggcgacgcccaggacttcatgagcaggcttgagctcaccgaccgcgaggcgcacatt
gccgcgcaggtgctccgcgagatccgggcgcgcatcgacttcctcatcgaagtcgggctg
aactacctcaacctctcgcgcgccgctgcctccctgtccggcggtgaggcgcagcggatc
cggctcgcgacccagatcggctccgggctcaccggtgtgctctacgtgctcgacgagccg
agcatcggcctccatcagcgcgacaaccgccgcctcatcgacacgctcatcaagctgcgc
gatctcggcaacactctgatcgtggtcgagcacgacgaggacacgatccgcaccgccgac
tggatcgtcgacatcggcccgggtgcaggggtcaacggcggcagggtcgtgcactccggc
tcctacgaatccctactccagaacacccactcgctcaccggcgactacgtgtccggccgc
aaggcgatcgaggttccgaagaagcgccgcaagatcgaccgcaagcggatgatcaaggtc
gtcggggcgaacgccaacaacctgcgcaaagtcgatgcggagttcccgctcggcacgttc
gtcgcggtcaccggagtctcaggatcgggcaagagcaccctggtcaacgacatcctgtat
cgagtgctcgccaaccagctcaatggagcccggaaagtaccgggcaagcacacccgcgtc
accggcctcgagaacctcgacaaggtcgtgcacgtcgaccagaacccgatcggccgcacg
ccgcgctcgaaccccgccacctacaccggggtgttcgatcgcatccgcaatctcttcgca
gagacgacggaggccaaggcacgcggctatctgcccggccggttcagcttcaatgtcaag
ggcggacgctgcgaggcctgctcgggcgacggcacgatcaagatcgagatgaacttcctt
cccgacgtctatgtcgcgtgcgaggtctgcgggggagcgcgctacaaccgcgacaccctc
accgtgcactacaagggcaagaacatcgccgaggtactcgacatgccgatcgccgaggcc
gccgacttcttcgagccgatcacggcgatccaccgcttcctccggacactggtcgaggtg
ggcctcggttacgtccgcctcggtcagagcgcgaccacgctctccggcggcgaggcgcag
cgcgtgaagctcgccaccgagctccagcgccgctcgaacggccgcagcgtctacgtgctc
gacgagccgaccacgggcctgcacttcgaggacgtccgcaagctcctgatggtgctcaac
ggcctggtcgacaagggcaacacggtcatcaccatcgagcacaacctcgacgtgatcaag
tcggccgattggctgatcgacatgggccccgagggcggagcgggcggcggccaggtggtg
gccgtgggcacgcccgagcatgtcgcgaaggccgagggaagccacacgggcatgttcctc
gccgagatcctcggctga
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