Rathayibacter tritici: A6122_1451
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Entry
A6122_1451 CDS
T04388
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rtn
Rathayibacter tritici
Pathway
rtn00061
Fatty acid biosynthesis
rtn00071
Fatty acid degradation
rtn01100
Metabolic pathways
rtn01212
Fatty acid metabolism
rtn02024
Quorum sensing
rtn04146
Peroxisome
Module
rtn_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rtn00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
A6122_1451
00071 Fatty acid degradation
A6122_1451
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
A6122_1451
09145 Cellular community - prokaryotes
02024 Quorum sensing
A6122_1451
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rtn01004
]
A6122_1451
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rtn04147
]
A6122_1451
Enzymes [BR:
rtn01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
A6122_1451
Lipid biosynthesis proteins [BR:
rtn01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
A6122_1451
Exosome [BR:
rtn04147
]
Exosomal proteins
Exosomal proteins of breast milk
A6122_1451
Exosomal proteins of breast cancer cells
A6122_1451
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
MbnB_TglH_ChrH
Motif
Other DBs
NCBI-ProteinID:
AND16588
UniProt:
A0A160KTN5
LinkDB
All DBs
Position
1659245..1660930
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AA seq
561 aa
AA seq
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MSTHPPRPWTRSYAPGVPTELELPTGSLVDIVTESAERYPQHVALEFFGRSTSYSQLADE
VERAAEGLRRLGVRAGDPVALILPNCPQHVVAFYAILRLGAVVVEHNPLYTPRELRHQFE
DHGARVVIAWTRVVPTVHDLPADLGIESVIAVDLTRAMPAPLRAALRLPLKKARESRFAL
TGPARGAVEWESLLRRRIDSEHPRPTAEDLAVIQYTSGTTGTPKAAELTHANLTANAAQS
RAWVPTVRRGDCVVYAVLPMFHAYGLTLCLTFAMSMGARLVLFPKFDPELVLKVVKKHPA
TFLPAVPPIAERLARSAQQSGVSLHGIEIAISGAMPLDPALVESFEALTGGTLVEGYGLS
ETSPVLMANPVGPTRRAGTVGLPLPGTDVRIVDPDDPAREMAVGEQGELIVRGPQVFRGY
YRKPEETAATFTSDGWFRTGDIATIDEDGFVRIVDRLKELVITGGFNVSPSEVEEVLLRL
PEIKEVAVVGLPDPRSGESVAAAVVLEPGAQLDVGAARKAVREALTAYKVPKRITVVDEL
PRNMIGKVLRRQVKAMLTDGD
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacccacccgccccgcccctggacccgcagctacgctcccggcgtgccgacggag
ctcgagctcccgaccggctcgctcgtggatattgtcaccgagtcggccgagcgctatccg
cagcacgtcgcgctcgagttcttcggccgctcgaccagctactcccagctcgccgacgag
gtcgaacgggccgccgagggcctgcgccgcctgggcgtgcgcgcgggcgacccggtggcc
ctcattctgcccaactgccctcagcacgttgtcgccttctacgcgatcctccggctcggc
gccgtcgtcgtcgagcacaatccgctgtacacgccgcgcgagctccggcaccagttcgag
gaccacggcgctcgcgtcgtgatcgcctggacccgcgtcgtcccgacggtgcacgatctt
cccgccgatctcggcatcgagtccgtcatcgccgtcgacctcacgcgggccatgcccgcg
ccactgcgggcggccctgcgcctccccctgaagaaggcacgagagtcgcgattcgccctc
acgggtccggctcggggggcggtcgagtgggagtcgctgctgcgccgccggatcgactcc
gagcacccacggccgacggcggaggacctggcggtcatccagtacacgagcggcacgacc
ggcacgcccaaggccgccgagttgacccacgcgaacctcaccgcgaacgccgcccagtcg
cgcgcctgggtgcccacggttcgacgtggcgattgcgtcgtctatgcggtgctgccgatg
ttccacgcttacggcctcacgctctgcctcacctttgcgatgagcatgggcgcgcgactg
gtgctgttccccaagttcgacccggagctggtgctgaaggtggtgaagaagcaccccgcc
acgttcctcccggctgtgccgccgatcgcggagcgcctggcgcgcagcgctcagcagagc
ggagtctcgctccacggcatcgagatcgcgatctccggcgcgatgccgctggatccggct
ctcgtcgagtcgttcgaggcgctcacgggcgggacgctcgtcgagggctacggcctctcg
gagacctcgccggtgctgatggcgaatcccgtcgggcccacgcggcgcgccggaacggtc
ggtcttccgctgccgggcacggacgtccgaattgtcgacccggacgacccggccagggag
atggcggtcggtgagcagggcgagctgatcgtccgtggtccgcaggtgttccgcggctat
taccgcaagcccgaggagacggcagcgaccttcacgagcgacggctggttccgcaccgga
gacatcgcaacgatcgacgaggacggcttcgtgcgcatcgtcgaccggctcaaagaactc
gtgatcaccggcggcttcaacgtctcgccgtccgaggtggaagaggtgctgttgcgtctg
cccgagatcaaggaggtggccgtggtcggtctacccgatccccgcagcggcgaatccgtg
gcggccgccgtcgtgctggagccgggtgcgcagctcgacgtcggcgcggcgcggaaggcc
gtgcgcgaggcgctgaccgcctacaaggtgcccaagcggatcacagtggtcgacgagctg
ccgcggaacatgatcggcaaggtcctccgccgccaggtgaaggcgatgctgaccgacggc
gactga
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