Rathayibacter tritici: A6122_1531
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Entry
A6122_1531 CDS
T04388
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
rtn
Rathayibacter tritici
Pathway
rtn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rtn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A6122_1531
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rtn03400
]
A6122_1531
Enzymes [BR:
rtn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
A6122_1531
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
A6122_1531
DNA repair and recombination proteins [BR:
rtn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
A6122_1531
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DUF7573
NFACT_N
Zn_Tnp_IS91
Motif
Other DBs
NCBI-ProteinID:
AND16668
UniProt:
A0A160KTU9
LinkDB
All DBs
Position
complement(1749535..1750449)
Genome browser
AA seq
304 aa
AA seq
DB search
MPELPEVEVVRAGLAPAVTGALVTGVDIVDERSLKRHVHPHGTFERLLVGRRLEGAVRRG
KFLWLPAGCDEALLVHLGMSGQVLLRTADAALPRLARIRIGIEHPEHGELALHFVDQRIF
GSMAVDALVPTPDGAPGGFAGEDARAGDWLRAVPSQVAHIARDPLDPSFDLGAVVASLAR
RNSGIKRALLDQTLVSGIGNIYADESLWAAELHPERPGSSLGEARIRRLFAEVRSVLERA
LAEGGTSFDAQYVNVNGASGYFSHSLHAYGQTGKPCARCGEAIVRVPFMNRSSHLCPHCQ
QLPR
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgagctgcccgaggtcgaggtggtgcgcgcgggactggcccccgccgtcaccgga
gcactggtcaccggcgtcgacatcgtcgacgagcggtcgctgaagcgccacgtgcatccg
cacggcacgttcgagcgcctgctggtcgggcgtcggctcgagggggcggtgcggcgcggc
aagttcctctggctgcccgcgggctgtgacgaggcgctgctggtgcacctcgggatgagc
ggccaggtgctgctgcgcacggcggacgcggcactgccccggctcgcgcgcatccggatc
gggatcgagcaccccgagcacggcgaacttgccctgcacttcgtcgatcagcggatcttc
gggtcgatggcggtcgacgcgctggtgccgaccccggacggcgcgcccggcggtttcgcg
ggtgaggacgcgcgcgccggggactggctgcgcgccgtaccctcgcaggtcgcgcacatc
gcgcgcgatccgctcgacccctccttcgacctcggggctgtcgtcgcctcgctggcacgg
cggaacagcgggatcaagcgagcgctgctcgatcagacgctggtgagcggcatcggcaac
atctacgcggacgagtcgctctgggcggcagagctgcacccggagcgacccggctcgtcg
ctgggcgaggcgcggatccgccgcctcttcgccgaggtgcgctcggtgctggagcgtgcc
ctggccgagggcggcaccagcttcgacgcgcaatacgtcaacgtgaacggcgcctccggc
tacttctcgcacagcctgcacgcgtacgggcagacggggaagccgtgcgcccgctgtggt
gaggcgatagtacgggtgccgttcatgaatcgctcctcgcacctctgcccgcactgccaa
cagctgccgcgctga
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