Ruminococcus torques: RTO_00520
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Entry
RTO_00520 CDS
T02606
Name
(GenBank) uncharacterized domain HDIG
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
rto
Ruminococcus torques
Brite
KEGG Orthology (KO) [BR:
rto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rto03019
]
RTO_00520
Messenger RNA biogenesis [BR:
rto03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RTO_00520
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
Cas3_HD
Motif
Other DBs
NCBI-ProteinID:
CBL24862
UniProt:
D4M0V0
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All DBs
Position
48365..49309
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AA seq
314 aa
AA seq
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MRFIDGLCEGETIRNVYLCKGKRSAETRNGKPYDNLILQDKTGTLDGKVWDPNSQGIADY
DEKDFIEVFGDVINYNGNLQLNIRQIRKAEEGEYNPADYMPTTDKSVDGMYEELTAYIRQ
ISNKYLRQVLEFYYIKDEAFIKKFKAHSAAKTVHHGFSGGLLEHTLSVTRMCDYFATSYS
ILNRDLLLSSAILHDIGKVKELSDFPDNDYTDEGQLIGHIVIGVEMIDDAIRSIPDFPVK
LAHELKHCIVAHHGELEYGSPKKPALAEAVALNMADSTDAKLQTLTELFKGKTGTEWLGY
NRLFESNLRRASED
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagatttatagatggattatgcgagggagaaacaatcaggaatgtatatctttgtaaa
ggaaaacgttccgcagagacgagaaatggaaagccgtatgataatctgattcttcaggat
aaaacaggaacattagatggaaaagtatgggatccgaactcccagggaatcgcagattat
gatgagaaggactttatcgaagtttttggagatgtgatcaattataacggaaatcttcag
ttgaacatccgtcagatcagaaaggcggaagagggagaatacaatccggcagactatatg
ccgacaacagataagagtgtagatggaatgtacgaggaactgacagcttatattcgtcag
atctctaacaaatatttaagacaggtgttggaattctactatataaaagatgaagcgttt
atcaaaaaattcaaggcacattccgcagcgaagacagtacatcacggattttccggagga
ttgcttgagcatacactcagtgtaactcgtatgtgtgattattttgcaacaagctactct
attttgaatagagatctgctccttagctctgcaattctccatgatattggaaaagtgaaa
gaactttctgattttccggacaatgattatacagatgagggacaactgatcggccatatc
gtgatcggtgtcgagatgatcgatgatgcgattcgttctatcccggactttccggtgaag
cttgctcatgaactcaagcattgtatcgttgcacatcacggtgaactggaatacggttct
ccaaagaaaccggcactggcagaggcagtggcactgaatatggcagattcaacagatgca
aagcttcagacattgacagaactgtttaaaggaaaaacaggaacagaatggcttggatat
aatcgtctgtttgagtctaatttaagaagagcatctgaggattaa
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