Ruminococcus torques: RTO_00820
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Entry
RTO_00820 CDS
T02606
Name
(GenBank) Deoxycytidylate deaminase
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
rto
Ruminococcus torques
Pathway
rto00240
Pyrimidine metabolism
rto01100
Metabolic pathways
rto01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
rto00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
RTO_00820
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
rto02044
]
RTO_00820
Enzymes [BR:
rto01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
RTO_00820
Secretion system [BR:
rto02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
RTO_00820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
Bd3614-deam
SNAD4
APOBEC_N
APOBEC4
Motif
Other DBs
NCBI-ProteinID:
CBL24887
UniProt:
D4M0X5
LinkDB
All DBs
Position
complement(82920..83408)
Genome browser
AA seq
162 aa
AA seq
DB search
MSDKRTDYLSWDEYFMGVAMLSGMRSKDPNTQVGCCIVSQDNKILSMGYNGLPMGCSDDE
FPWAREGEDPLETKYVYTTHSELNAILNYNGGSLAGAKLYVSLFPCNECAKAIIQAGIKE
VIYDCDKYADTAGVKASKRMMDAAGVRYHQYHRTGRKIEFEI
NT seq
489 nt
NT seq
+upstream
nt +downstream
nt
atgtcagataaaagaacagattatttatcatgggatgaatattttatgggcgtggcaatg
ctttccggaatgcgatcaaaagacccgaatacacaggttgggtgttgtatcgtaagtcag
gataacaagattctttccatgggatataatggtcttccgatgggatgttctgatgatgaa
ttcccatgggcgcgcgaaggcgaagatccgttagagacaaaatatgtatatacaacgcat
agtgaattgaatgcaattttgaattataatggcggaagtcttgcgggagcaaaactctac
gtatctctttttccatgcaatgaatgcgcaaaagcaattattcaggcaggaattaaagaa
gttatttatgattgtgacaaatacgcggatacagcgggagtgaaagcatcaaaacgaatg
atggatgcagcaggagtgagatatcaccagtaccatcgaacaggcagaaaaattgaattt
gagatataa
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