Ruminococcus torques: RTO_01590
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Entry
RTO_01590 CDS
T02606
Name
(GenBank) SpoIID/LytB domain
KO
K06381
stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:
4.2.2.29
]
Organism
rto
Ruminococcus torques
Brite
KEGG Orthology (KO) [BR:
rto00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rto01011
]
RTO_01590
Enzymes [BR:
rto01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
RTO_01590
Peptidoglycan biosynthesis and degradation proteins [BR:
rto01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
RTO_01590
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoIID
Oxygenase-NA
SurA_N_2
Motif
Other DBs
NCBI-ProteinID:
CBL24951
UniProt:
D4M139
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All DBs
Position
complement(138880..139779)
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AA seq
299 aa
AA seq
DB search
MRDTIRNKIKLFFAFLIILFLLPYIISVFINGKNAVQGADSDNASVYLAGILAGETDGGY
EIEALKAQAVVLRTELYRTEKEKQTILDKCLTQTQMKKKWGPKYEENLKKCQQAAQETKG
IVLWYHETFAWAPFHQSSNGKTRDVQEVLGNADYPYITAKECPLDKAAEDEIQVHLIEYK
EIQKRCREFLVAEEQKKAENGYGYEDFEIQEWDSSGYVRKMRIGETICTGDQFRDALKLP
SSSFSFYESPHGLKIATVGKGHGFGMSQWTAQEMAKDGKNYEEILQYFYEGTELHHIDE
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgatacaattagaaataaaataaagttattttttgcatttcttatcatactgttt
ttacttccttacatcatttctgtttttataaacggaaagaatgcggtgcagggagctgac
agcgataatgcatctgtgtatctcgcaggaatactcgcaggagaaacagatggaggatat
gaaatagaagcattgaaggcacaggcggttgttctacgtacagagttgtacagaacagag
aaagaaaagcaaactattttggataaatgtctgacgcagactcagatgaagaaaaagtgg
gggccaaaatacgaagagaatttgaaaaaatgtcaacaggcagcacaggaaacaaaagga
attgtattgtggtatcatgagacctttgcatgggcaccgtttcatcaatccagtaatgga
aagaccagagacgtgcaggaggtacttgggaatgcagattatccgtacatcacagcaaaa
gaatgtccgcttgacaaggcggcagaagatgaaattcaggtacatttgatagaatataaa
gagatacaaaagagatgtagagaattccttgtggcagaggaacagaaaaaagcggaaaat
ggttatggatatgaagattttgaaattcaggaatgggattcttccggttatgtccgaaaa
atgaggattggagagacgatatgtacaggagatcagttccgtgatgcactgaaacttcct
tcgagttcattttctttttatgaaagtccacacgggttgaagattgcaacggttggaaaa
gggcacggattcggaatgagtcagtggactgcacaggaaatggcaaaggatgggaaaaat
tatgaagagatcctgcaatatttttatgaaggaacagaactacaccacatagatgaataa
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