Ruminococcus torques: RTO_01860
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Entry
RTO_01860 CDS
T02606
Name
(GenBank) DNA polymerase III, epsilon subunit and related 3'-5' exonucleases
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rto
Ruminococcus torques
Pathway
rto03030
DNA replication
rto03430
Mismatch repair
rto03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rto00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RTO_01860
03430 Mismatch repair
RTO_01860
03440 Homologous recombination
RTO_01860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rto03032
]
RTO_01860
03400 DNA repair and recombination proteins [BR:
rto03400
]
RTO_01860
Enzymes [BR:
rto01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RTO_01860
DNA replication proteins [BR:
rto03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RTO_01860
DNA repair and recombination proteins [BR:
rto03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RTO_01860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
CBL24976
UniProt:
D4M164
LinkDB
All DBs
Position
complement(169974..170480)
Genome browser
AA seq
168 aa
AA seq
DB search
MKVFFDIESTGLDPVRDEILQLSIINENEEVLFSDYIRLVRHKTWNEAEKINHISPEMVK
DKQTFESRKQEIQKIFDQATELIAYNANFDISFLKAVGIVLPDVPISDPMIDFSFVYREY
SEKYGIFKWQKLVVAARYYGYEFDAHDSLEDIKATKFVYDKMKEKSQK
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtattttttgatatagaatcaactggactagatccggttcgagatgaaatttta
caattgagtattataaatgaaaatgaagaagtcctgtttagtgattacattcgtctggta
agacataaaacttggaatgaggctgaaaaaatcaatcatatttctccggaaatggtaaaa
gataaacaaacatttgaatcaagaaaacaagaaatacaaaagatttttgatcaagcaaca
gaactgattgcatataatgctaattttgatatatcttttttaaaggcagttggaattgtg
ctacctgatgttccaatctcagatcctatgattgatttttcgtttgtatatagagaatac
agtgagaaatatggaattttcaagtggcagaaattggtcgttgcagccagatattatggg
tatgaatttgatgctcatgactctttggaagatatcaaagcaacaaaatttgtatatgat
aaaatgaaagaaaaatcacagaaataa
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