Ruminococcus torques: RTO_02200
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Entry
RTO_02200 CDS
T02606
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
rto
Ruminococcus torques
Pathway
rto03030
DNA replication
rto03430
Mismatch repair
rto03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rto00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RTO_02200
03430 Mismatch repair
RTO_02200
03440 Homologous recombination
RTO_02200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rto03032
]
RTO_02200
03400 DNA repair and recombination proteins [BR:
rto03400
]
RTO_02200
Enzymes [BR:
rto01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RTO_02200
DNA replication proteins [BR:
rto03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RTO_02200
DNA repair and recombination proteins [BR:
rto03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RTO_02200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
RuvB_N
TIP49
AAA_22
AAA_30
AAA_assoc_2
AAA_18
AAA_14
ResIII
AAA_7
AAA_5
AAA_19
RCF1-5-like_lid
AAA_16
Rad17
TsaE
PIF1
Mg_chelatase
DNA_pol3_delta_C
DUF8007
DUF815
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
CBL25006
UniProt:
D4M194
LinkDB
All DBs
Position
complement(205947..207539)
Genome browser
AA seq
530 aa
AA seq
DB search
MSYTALYRKFRPSEFEDVKGQDHIVTTLQNQIKANRIGHAYLFCGTRGTGKTTVAKIFAK
AVNCEHPVNGSPCGECEMCKSIAAGTSMNVIEIDAASNNGVDNIREIREEVTYRPTEGKY
KVYIIDEVHMLSIGAFNALLKTLEEPPEYVIFILATTEVHKIPITILSRCQHYDFKRISI
ETITDRMRDLMQTEQVEVEEKALRYIAKAADGSMRDALSLLDQCIAFYLGQKLTYDHVLE
VLGAVDTDVFSRLLRKVLERDVAGVLDIVEDLVMQGRELTQLAADFTWYLRNLLLVKTSD
NIEDVLDVSTENMLQLKEESKMIELDMLLRYIRIFSELSGQLKYATQKRVLLEVALIKLC
TPAMETGQDALLDRIRAVEDKVEKGLAAAADMPQRVVYVNGDDASSSGSGVVGSRKAKPE
LPNAIPEDVQEVVKNFRSIADEASGMIRGFLKKARLSLGGDNRLLIVLPDAMSADMVGRE
DHVQELEQLIEEKIGKKVEVDVRHVEEGRHFEDTFVDIEQKINMEITVED
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatacggcgctatacagaaagttccgtccttctgaattcgaagatgtaaaagga
caggatcatattgttacaacgcttcagaaccagattaaggcgaacaggatcggacatgcg
tatctgttttgcggaacgcgaggaaccggaaagacaacggttgcgaaaatatttgcgaag
gcagtaaactgtgagcacccggtaaatggaagtccatgcggagagtgtgagatgtgtaaa
tctatcgctgccggcacttcaatgaatgtgatcgagatcgatgctgcatcgaacaatggt
gttgataatatccgtgagatccgggaggaagtgacatatcgaccgacagaaggtaagtat
aaagtatacattatcgacgaggtgcatatgctttccatcggagcatttaacgcattgctt
aagacacttgaggagccgccggagtatgttatttttattctggcgacgacagaagtgcat
aaaatcccaattacgattctttccagatgtcagcactatgatttcaagagaatcagcatt
gagacaattacagatcgtatgcgtgatctgatgcagacagaacaggtagaagtggaagaa
aaagcacttcgctatatcgcaaaggcggcagacggatctatgcgtgatgcactcagtctg
ctggatcagtgtattgcattttatctgggacagaagctgacgtatgatcatgtgcttgaa
gtacttggtgcggtggatacggatgtgttcagccgcctgcttcggaaagtattggaaaga
gatgttgccggagttcttgatatcgtggaagatctggttatgcagggacgtgaactgacc
cagctggccgcagattttacatggtatctgagaaatttgcttttggttaaaacttctgat
aatatagaggacgtgctggatgtgtctacggaaaatatgctgcagctcaaggaagaatca
aagatgatcgaacttgatatgctgttgcgttatatccgtatattctcagaactttccggt
cagctgaagtatgcgacgcagaagagagtgcttctggaagttgcactgatcaagctttgt
actccggcgatggagactggtcaggatgcacttctggacagaatccgtgcggtagaagac
aaagtagagaaaggacttgctgcagccgcagatatgccgcagcgagttgtttacgtgaat
ggagatgatgcgtcatcatccggatcaggcgttgtgggaagcaggaaggcgaaaccggag
ctgccgaatgcaattccggaggatgtgcaggaagtggtgaagaatttccgttctatcgca
gatgaagcgtcaggtatgatcagaggctttcttaaaaaagcaagactgagtcttggtggt
gacaatcgcttgctgattgtactgccagatgctatgtcggcagatatggttggcagagaa
gatcatgtgcaggaacttgaacagctcattgaagagaagattggaaagaaggtcgaggtg
gatgtccgtcatgtagaagagggcagacactttgaggatacatttgtggacatagaacag
aaaataaatatggaaataacagtggaggattag
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