Ruminococcus torques: RTO_02420
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Entry
RTO_02420 CDS
T02606
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
rto
Ruminococcus torques
Brite
KEGG Orthology (KO) [BR:
rto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rto03032
]
RTO_02420
03400 DNA repair and recombination proteins [BR:
rto03400
]
RTO_02420
Enzymes [BR:
rto01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RTO_02420
DNA replication proteins [BR:
rto03032
]
Prokaryotic type
DNA Topoisomerases
RTO_02420
DNA repair and recombination proteins [BR:
rto03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RTO_02420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
CBL25025
UniProt:
D4M1B3
LinkDB
All DBs
Position
complement(224808..227357)
Genome browser
AA seq
849 aa
AA seq
DB search
MEDNIFDKVHEVDLKKTMETSYIDYAMSVIAARALPDVRDGLKPVQRRILYSMIELNNGP
DKPHRKCARIVGDTMGKYHPHGDSSIYGALVNLAQEWSTRYPLVDGHGNFGSVDGDGAAA
MRYTEARLSKISMEMTADINKNTVDFIPNFDETEKEPTVLPSRFPNLLVNGTSGIAVGMA
TNIPPHNLREVISAVVQIIDDQIADKEETTIEEILEIVKGPDFPTGAEILGTRGIEEAYR
TGRGKIRVRAVTNIEPMQNGKNRIIVTELPYMVNKARLIEKIAELVRDKKIDGITDLSDQ
SNREGMRICIELRRDVNPNVILNQLYKHTQLQDTFGVIMLALVDNQPKVMNLLEMLQYYL
RHQEDVVTRRTQYDLNKAQERAHILEGLLIALDNIDEVIRIIRGSKNVQEAKAELIKRFG
LSDVQAQAIVDMRLRALTGLEREKIEAEYAELMKKIEEYKAILADKKLLLGVIKKEILVI
AEKYGDDRRTKIGFDEFDISMEDLIPRENVVITMTKLGYIKRMSMDTFKSQNRGGKGIKG
MQTLEDDYIRELFITTSHHYIMFFTNTGRVYRLKAYEIPEAGRTARGTAIINLLQLMPEE
KITAIIPLREYEEGKYLFMATEKGLVKKTPIQDYANVRKTGLAAIVLREDDKLIEVKITD
NTEDIFLVTKYGMCIRFNETDVRSTGRVSMGVRGMNLTDNDVVIGMQIESQGKDMLIVSE
RGMGKRTDMDEFTRQNRGGKGVKCYKITEKTGNVVGMKAVDEDSEIMIINTEGIIIRMKC
SDISVYGRITSGVKLINLKENDTVASVAKVRKASAEIDGEEVEISDEDESEKSEEGSVSE
TTEQETTEE
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaatatttttgacaaagtccatgaagtcgatctgaaaaagacgatggagact
tcatacatcgactatgccatgagcgtaatcgctgcccgtgctcttccggatgttagagac
ggacttaagccggtacagagacgaattctgtactcaatgatagaattaaataatggaccg
gacaaaccgcatcgtaaatgtgcgcgtattgtcggtgatacgatgggaaaataccatcct
catggagacagctcgatttatggagctctcgttaatcttgcacaggagtggtctacacgt
tatccccttgtagatggacacggaaactttggttcagtggacggtgatggcgctgctgca
atgcgttacacagaggcacgtctgagtaagatctctatggagatgacagcggacattaac
aaaaataccgtagattttatcccgaactttgatgaaacagagaaggagcctactgtactt
ccgtccagatttccgaatcttctggtaaatggaacatcaggtatcgcagtaggtatggca
acgaatatcccgccgcataatctgcgtgaggttatttcagcagttgttcagatcatagat
gatcagattgcagataaagaagagacgacaatcgaggaaatccttgaaatcgtgaaggga
ccagatttccctacaggtgcggagattcttggtacaagaggaattgaagaggcatacaga
acaggacgcggtaagatcagagtgcgtgcggtgacaaacattgagccaatgcagaacgga
aagaacagaattattgttactgagcttccgtatatggtaaataaagcacgtctgatcgaa
aagatcgctgagcttgtaagagataaaaagattgatggaatcactgatttaagtgaccag
tctaaccgtgaaggtatgagaatctgtattgagcttcgtcgtgatgtgaatccgaatgta
attctgaatcagttatataaacatacacagcttcaggatacatttggtgtgatcatgctg
gcgctcgttgataatcagccgaaggttatgaatctccttgagatgttgcagtactacctg
cgtcatcaggaagatgtcgtaacaagaagaacacagtatgacctgaataaagcacaggag
agagctcatatcctggaaggattactgatcgctctggataacattgacgaagtcatccgc
atcatccgtggttctaagaatgttcaggaagcaaaagcagaattgatcaaacgctttgga
ctcagtgatgtccaggcacaggcaatcgtagatatgcgtctgcgtgcactcacaggtttg
gaacgtgagaagattgaagctgaatatgcagagcttatgaagaagattgaagagtataaa
gcaattcttgctgataaaaaacttcttcttggtgtgatcaaaaaagagattcttgtaatt
gctgagaaatacggtgatgacagaagaactaagattggatttgatgaatttgacatctcc
atggaagatctgattccgcgcgagaatgtcgtaattacaatgacaaaacttggatatatc
aagagaatgtctatggacacattcaagagccagaatcgtggtggtaaaggtattaaggga
atgcagactctggaggatgattacatccgggaactgtttattacaaccagtcaccattac
attatgttctttacgaacacaggccgtgtctacagactgaaagcttacgagattccggag
gcaggaagaactgcacgtggaacagcaatcattaacctactccagctgatgccggaagag
aagattactgcgatcattccgcttcgtgagtatgaggaaggcaagtatctgttcatggca
acggagaaaggtcttgtgaagaagactccgattcaggattatgcaaatgtcagaaagaca
ggacttgcggcaatcgtactgcgtgaggatgataagctgatcgaagttaagatcacagat
aatacagaggatattttcctcgttacaaaatacggtatgtgtatccgtttcaatgagaca
gatgtacgttccacaggtcgtgtttctatgggtgtacgcggtatgaacctgacagataat
gacgttgtgatcggtatgcagatcgaaagccagggcaaagatatgctgatcgtatctgag
cgtggtatgggtaaacgtacagacatggatgaatttactcgtcagaatcgtggcggtaaa
ggtgtgaaatgttataagatcacagagaagacaggaaatgttgtcggaatgaaagctgta
gatgaagacagtgagatcatgatcatcaacacagagggaattattatccgtatgaagtgc
tctgatatctctgtttacggcagaatcacatcaggtgtaaaactgatcaacctgaaggaa
aatgacactgtagcaagcgttgcgaaggtgagaaaggcttctgccgagatcgacggtgaa
gaagttgagatttctgatgaagatgagtctgaaaaatcagaggaaggatcagtttctgag
acaactgagcaggaaacaacagaggaataa
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