Ruminococcus torques: RTO_03410
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Entry
RTO_03410 CDS
T02606
Name
(GenBank) exonuclease, DNA polymerase III, epsilon subunit family
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rto
Ruminococcus torques
Pathway
rto03030
DNA replication
rto03430
Mismatch repair
rto03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rto00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RTO_03410
03430 Mismatch repair
RTO_03410
03440 Homologous recombination
RTO_03410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rto03032
]
RTO_03410
03400 DNA repair and recombination proteins [BR:
rto03400
]
RTO_03410
Enzymes [BR:
rto01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RTO_03410
DNA replication proteins [BR:
rto03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RTO_03410
DNA repair and recombination proteins [BR:
rto03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RTO_03410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DEDDh_C
Rv2179c-like
DNA_pol_A_exo1
DUF3072
Motif
Other DBs
NCBI-ProteinID:
CBL25113
UniProt:
D4M1K1
LinkDB
All DBs
Position
complement(328120..328815)
Genome browser
AA seq
231 aa
AA seq
DB search
MLKSYIAFDLETTGLSPQEHEIIEIGALKVREGKVVDRFMEFVHPDKPITPMITNITHIT
NDMVAGARSCPEVIHDFLSFCEDDVLIGHNVMFDYSFVKCSAVREGLTFEKMGIDTLKIA
RKVHKDFESKSLGALCDYYHIENPAAHRAYYDALATAKLYQTLAHYFEPQDPKVFQPLQL
QYKIKKVQPATPKQIALLERLTEQKELIPDWDTTTLTRSEASRIIDRLLKS
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaatcatatattgcatttgacctggagacaaccgggctaagtcctcaggaacat
gaaattatagagattggtgccctcaaagtccgggaaggaaaggtcgttgaccgttttatg
gaattcgtccatccagacaaaccgatcacaccgatgatcaccaacatcacacatatcaca
aatgatatggttgcaggagcaagatcctgcccggaagtcatccacgattttctctccttt
tgtgaagatgacgtgctgatcggacacaacgtcatgtttgactatagctttgtaaaatgc
agtgcagtcagagaaggtcttacatttgaaaaaatgggaatcgatactttaaaaattgcc
cgcaaagtacataaagactttgagtctaaaagtctcggtgcgttatgcgactattatcat
attgagaatcctgctgctcaccgcgcatactatgatgcactcgcaaccgcaaagctttat
cagacactggcacactattttgagccacaggatccgaaagtgttccagcctcttcaactt
caatataaaattaaaaaagtgcagcctgccacaccaaagcagattgcactcttagaacgt
ctgacggaacagaaagaactgatacctgactgggatacaactacgctgacaagaagcgaa
gcctcccggatcattgacagacttttgaaatcttaa
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