Ruminococcus torques: RTO_05790
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Entry
RTO_05790 CDS
T02606
Name
(GenBank) ATP-dependent nuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
rto
Ruminococcus torques
Brite
KEGG Orthology (KO) [BR:
rto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rto03400
]
RTO_05790
Enzymes [BR:
rto01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RTO_05790
DNA repair and recombination proteins [BR:
rto03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
RTO_05790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
ATPase_2
RRP7
Motif
Other DBs
NCBI-ProteinID:
CBL25324
UniProt:
D4M262
LinkDB
All DBs
Position
complement(565834..569274)
Genome browser
AA seq
1146 aa
AA seq
DB search
MAHSCERQPVFCLDIKKKGGSQSMSLQFIFGNSGSGKSHYLYQQIVEESIRHPEKNYLVL
VPEQFTMQTQKDLCMAHPRGGIMNIDVLSFGRLAHRVFEETGKERQPILDDEGKNLVLRK
IAGNYEDELTVLKGNLKKQGYISEVKSVISEFTQYGIDFEQLDSFMEGLNPESYLYYKLK
DIRKVYEGFEDYLRDKYITKEELLDVLSQAVPEAKMLKDSVIAMDGFTGFTPVQNRLIGE
LLKVCDKIMLTVEIDRREDPFVYKHPYQLFALSKQMVTSLTEVAQEVRVEIDEPVWLCKN
PSYRFKENPEMAFLEEELFRYSRRKYSGEKMRSISLHEVHTPQEEAQYVAEEIRRLVREE
GYRYREIAVIASDLSTYADALEKACDRYEIPVFMDHKKSILLNSFVEYLRSLLVMVEQNY
TYESVFRYLRTSLCGFTRDEVDRLENYCLALDLKGFKKWDQVWVRKTPMTTKEELEELNH
LRMRFVEKLTPLHTVLKKRKKTVKEITLAVYEYLVQEKIQEQLAELEQKFQEDGELALAK
EYAQIYRIVLELFDKFVELLGEEEIPLKEYCELLDAGLEEAKVGVIPPSLDQVVIGDMER
TRIKNIRALFFVGANDTLLPGNAGARGLLSERDRKQFQEKKMNLSPGPKEKLYIQKFYLY
MNLTKPSELLYLSWAKVSGEGKALRPAYLIQDLMRLFPVLVPVEEDRKGLLDHEMMRKSG
LLQIAEGLREREHGLDDSWKELYRWFVKDEQSQETLKQMIEAGFYRKDEPSLGSRVAKEL
FLDPKRVSVTRLERFASCAYAHFLNYGLRLSEREKYGFEAMDLGNIAHQALERFAHKVEE
EGLDWVTMPEEKRERLIDESVEESILDYGNTVLFSSARNEYMIHRIKQLINRSVWALTQQ
MAAGDFVPSGCEFKFGSGKIDRIDTCEDENAVYVKVTDYKTGRKAFDITAFYHGLQMQLP
VYLNAALEIERQKNPEKEVLPAGIFYYRIQDPIVKKEETKAEVEQSILKELKLDGLINAD
ENVVEHLERNLSGTSTFYPLRMNKNRTLGSASKALSKENFDTVLAYTKEKEKELKDVMYQ
GEVAALPYVLDEMTGCDYCGCRDICGFDQRIEGCEYRRLRKYTLEEALNSMKERLGILEE
KGEAGE
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atggctcattcctgtgaacgacagcctgtcttttgcttagatattaagaagaaaggcggg
agtcagagcatgtcgttgcagtttattttcgggaattccggaagcggaaagtcccattat
ttatatcagcagattgttgaggagtcaatccgtcatccggagaagaattatcttgttctg
gttccggagcagtttacaatgcagacgcagaaggacctgtgtatggcacatccgcgtggc
ggtattatgaatattgatgtcttaagttttggacgtctggctcaccgtgtttttgaagag
acaggaaaggaaagacagccgatccttgatgatgagggtaagaatctggtgctccgtaag
attgcaggaaattacgaagatgagctgaccgttcttaagggaaatcttaagaagcaggga
tatatcagcgaagtgaagtccgtgatatcagaattcacacagtatggaattgattttgaa
cagcttgattctttcatggaaggactgaatccggaaagttatctgtattataagttaaag
gatatccgtaaagtatatgaaggatttgaagattatctgcgtgataaatatatcacaaaa
gaagaattacttgatgtgttgagtcaggctgtaccggaagcgaaaatgcttaaagacagt
gtgatcgcaatggatggatttaccggatttacaccggtgcagaaccggctgatcggggaa
cttctgaaagtgtgcgataagattatgttgacagttgagatcgatcggagggaagatccg
tttgtctataagcatccgtatcagctctttgcgttgagtaagcagatggttacttcactg
acggaagtggcgcaggaagtgagagtggagattgatgagccggtctggttatgcaagaat
ccgtcgtatcggttcaaagagaatccggagatggcgtttttggaagaggaactatttcgt
tattccagaagaaaatacagtggagagaagatgcggtcaatttctcttcatgaagttcat
acaccacaggaagaggcacagtatgtggcagaggagatccggcgtctggtgagagaagaa
gggtacagatatcgggaaatcgcagtgattgcttcggatctgagtacttatgcagatgct
ttggaaaaagcatgtgatcgatatgaaatcccggtctttatggatcataagaaaagtatt
ttattaaattcttttgtagagtatttaagaagcttgctggtgatggtagaacagaactat
acttacgaaagcgtttttcgttatctgcggaccagcctgtgtgggttcacaagagatgaa
gtagaccgtctggaaaattactgtcttgcgctggatctgaaaggattcaagaaatgggat
caggtctgggtgagaaagacaccgatgacgacaaaggaagaactggaagaactgaaccat
ctgcgcatgcgctttgtggaaaaactgacaccgctgcatacagtcctgaagaagagaaaa
aagacggtaaaagagatcacacttgcagtttatgaatatctggttcaggagaagatccag
gagcagcttgcagaattggagcagaaattccaggaagatggagaactggcactggcgaag
gaatatgcacagatttatcgtattgttttggaattattcgataaattcgttgaacttctg
ggggaggaagagattcctttgaaggaatactgtgaacttttagatgcaggacttgaagag
gcgaaagtaggtgtgatccctccaagtctggatcaggttgtgatcggagatatggagaga
acacgtatcaaaaatatccgcgcattattttttgtcggagcaaatgatacgcttcttcca
ggaaatgcaggggcaagaggtctgctttccgagcgagacagaaaacagtttcaggagaag
aaaatgaatctttctcccggaccaaaagagaaattatatattcagaaattttatctctat
atgaatctgacgaaaccgtcagaacttctgtatctgtcctgggcaaaagtatccggggaa
ggaaaagcacttcgtccagcgtatctgatccaggatctgatgcgtctgttcccggtactt
gttccggtagaggaagacagaaagggactgcttgatcatgagatgatgagaaagagcgga
ctcttgcagattgcagaaggtttaagagagagggagcatggactggatgattcctggaaa
gaactgtacagatggtttgtaaaggatgaacagagtcaggaaactctgaagcagatgata
gaagccggtttctaccggaaggatgagccgagccttggaagtagagtagcaaaagaactc
ttcctggatccaaagcgtgtcagcgtaacaagactggaacgttttgcttcctgtgcatat
gcacatttcctgaattacggactccgtctgtcagaacgggagaaatatgggttcgaagca
atggatctgggaaatattgcacatcaggcactggagcgatttgcacacaaggtagaagag
gaaggtctggactgggttacaatgccggaagagaagcgggagcggctgattgatgaaagt
gtagaagaaagtattctggattatggaaatacagttctattttcatctgcgcgtaatgag
tatatgatccacagaatcaagcaattgatcaaccggtccgtctgggcactgacacagcag
atggcggcaggcgattttgtgccgagcgggtgtgaatttaagttcggaagcggaaagatt
gacagaattgatacatgtgaagatgaaaatgcagtctatgtgaaggtaacggattataaa
actggaaggaaagcatttgatatcacagcattctatcacggtttgcagatgcagcttccg
gtttatctgaatgcggcactggagatcgaacggcagaaaaatccggagaaagaagtactt
ccggccggtattttttattacaggatccaggatccgattgtgaagaaagaagagacaaaa
gcggaagttgagcaaagtattctaaaagagctgaagctggatggactgatcaatgcagat
gaaaatgtagttgagcatctggagcggaatctgagtggaacttcaacattctatccgctg
cggatgaataagaacagaacgctcggttcggcatcaaaagctttatcaaaggagaacttt
gatacggttcttgcgtacacgaaagagaaagaaaaagagctgaaggacgtgatgtatcag
ggagaggttgcggcacttccgtatgtacttgatgagatgacaggctgtgattactgtggg
tgcagggatatctgcggatttgaccagaggattgaaggctgtgagtacagaagattaaga
aaatataccttggaagaagcgttgaattctatgaaagagcgtcttggtattttggaagag
aaaggggaggcaggagaatga
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