Ruminococcus torques: RTO_09280
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Entry
RTO_09280 CDS
T02606
Name
(GenBank) transcriptional regulator, IclR family
KO
K19333
IclR family transcriptional regulator, KDG regulon repressor
Organism
rto
Ruminococcus torques
Brite
KEGG Orthology (KO) [BR:
rto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rto03000
]
RTO_09280
Transcription factors [BR:
rto03000
]
Prokaryotic type
Helix-turn-helix
IclR family
RTO_09280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
HTH_24
MarR
HTH_5
TrmB
MarR_2
HTH_11
DUF7343
HTH_20
TFIIE_alpha
Fe_dep_repress
HTH_AsnC-type
Nup98_GLEBS
Dimerisation
HTH_38
DnaD_N
HTH_27
Penicillinase_R
HTH_23
HTH_29
Rrf2
DUF742
Motif
Other DBs
NCBI-ProteinID:
CBL25626
UniProt:
D4M314
LinkDB
All DBs
Position
complement(932971..933732)
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AA seq
253 aa
AA seq
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MVQSLARGIEILSIIQEKGSTTAVEIATELDVDKSTVSRLISTLMQYDMISIDPISKKYR
LGFRLLYLSEGVKRNFNIAMIARPYLYKICDETKESVHLAVMGNKKMYIADQVRSQREYN
LSAQIGMIEAWHCSSVGKCVLAYKPQSFIENLFSDYDFEKYTTHTIDNFQDLEMELKKIK
EQGYAIDDEERTLGVRCMAVPIFNYGGNVSYCIGISAPKEQITEKTKKQYISCMKKYARQ
ISNELGYGLYHKV
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atggtacagtcattagcgagaggaatagaaattttgtcgatcattcaggaaaagggaagt
acaacagcggtagagattgcgacagaacttgatgttgataagagtacggtttcgagattg
atttcaacattgatgcagtacgatatgattagtatagatcctattagcaagaagtacaga
cttggatttcgcctgttatatcttagtgaaggtgtaaaacggaattttaatattgcgatg
atcgcccggccgtatctgtataaaatctgtgatgagacgaaagaaagtgtacatcttgca
gtaatgggaaataaaaaaatgtatattgcagatcaagtgagaagccagagggaatataat
ctgtcagcacaaattgggatgattgaagcatggcactgtagttctgtaggaaaatgtgtt
ttggcatataagccacagtctttcattgagaatttgttttctgattatgattttgaaaaa
tatacgacacatacaattgataatttccaggatttggaaatggaattaaaaaagattaaa
gaacagggatatgcaattgatgatgaagaacggacattgggagtaaggtgtatggcagtt
ccaatctttaattatggaggaaatgtgagttactgtattggaatttcagcaccaaaggaa
cagattacagaaaaaacgaagaaacaatatatttcctgtatgaaaaaatatgctcgtcag
atcagtaatgagttaggttatggattatatcataaggtatga
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