Ruminococcus torques: RTO_14010
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Entry
RTO_14010 CDS
T02606
Name
(GenBank) diguanylate cyclase (GGDEF) domain
Organism
rto
Ruminococcus torques
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_3
PAS_4
Motif
Other DBs
NCBI-ProteinID:
CBL26021
UniProt:
D4M459
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All DBs
Position
complement(1437803..1441189)
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AA seq
1128 aa
AA seq
DB search
MKFKKKLWISLILFILFGTVFSGWIFHQNTTREYLVFDNTTQLVTTERFEDNIRIEDVIL
PDSFQNQQSILFKTTHTRAEVLLDGEKIYEFGNDTDTLRFMKSPGSCWHIVDLPKNSDGK
HLQVRIIPVYSDYYGNSFHLFGGTKGDCTLKILSNSLCSLVLSCEILSLGIICLILCFSI
MRKNDKYSSDESYMIFLNLGVFSLLITLWTLKQCGFLQFLIPDPRALYFIDYFTFFLFPV
PFNFILYDICKSKYRKGAVHLSILYLCNMAAAVLLQCTGVIDIFRILPVTHLIMLVNVIY
TVILIRYESIKLQNEAARHFKYPMYLVMAFGVAELIAYYIQHFQQTSIFLPFGTMLFTLL
LVWIQVSRFYDHYLQKQKLVYLQKLADTDLLTDTMNRNAYEKKVNRLNVQKDKLHTTGLI
LFDLDNLKIINDRFGHEKGDEALQLCSQCIKQFFPDKENLFRIGGDEFAYFYNKNKENNI
GDKIAQLNQTLESTEHTFNYPLSISSGYACFLPEMDNTFKDLAKRSDLMLYRIKRKRKLA
YTGSSELLTSNTLINAGTSAEEKQQEEIFSHTKNYQDFSLKELCNIIDLLSPSTDGFLYM
LDFRTDFFYISPQALDRFCLPGNEFHNMTKELKEFVYKKDYPLLKAELDNLLNTDRNTHN
MDYRWLDLDREPVWINCRGYIIRDDQQEPIYLIGCINEIGNRQKADNITGLLGETSLEKY
FKDSVSTLNKGFLIHVGIDGFKMINENYGWDYGDYVLRETASCILSCISDSQKVYKIASD
EFIILDTTSSDMTTASNLYDHICKHINQFIEENNFAAVFTISAGILPLPDLSQTGYAELI
KRTDFSLTMAKQHGRNCCYIFQEEEYQNFLRIREITNELHSAVNHGFRGFSIIFQPVMDI
RQDKLTGAEVLIRFTSKKFGPISPAEFIPLLETSGLIIPTGRWFMREAITACRKIRMQIP
DFKVNINVSQVQITKSDVITDLISEMNASGLPPAAIAIELTESILLEKNEKAQNFLKELK
QAGLQLALDDFGTGYSNFHYLSELHPDIVKIDRGFTSKAITDKKKYYLLNQFSNMIHNLG
LKLCIEGIETEDELQKIKLLKPDYCQGFYWGRPCSYDEFRKYFVDVDR
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttaagaaaaaattatggatctctttaatcctgttcatcctgtttggcactgtc
ttttcaggttggatttttcatcaaaatacgacccgtgaatatttagtttttgacaataca
acccagcttgtgacaaccgaacgattcgaagataatattcgaattgaagatgtcattctt
ccggattcttttcagaatcaacaatccattttgttcaagacaacccatacccgggctgag
gtattgcttgatggagagaaaatctatgaatttggaaatgatactgacacattaagattc
atgaagtctcccggctcttgctggcatattgtcgatcttccaaaaaacagtgatggaaaa
cacttgcaggtcaggattattcctgtatattcagactactacggaaattctttccatctt
tttggagggacaaaaggagactgtaccctgaagatcctgagcaacagtctctgttcattg
gttctaagctgcgaaatcttatcgttaggaatcatctgcctgattttatgcttttctata
atgaggaaaaatgataaatattcgtcagatgaatcctacatgattttcctgaaccttggt
gttttttctcttttgatcacactttggactctaaagcaatgtggttttctgcagttttta
attccagatccaagagcactttattttatagactactttacttttttcctgtttccagta
ccttttaactttattctgtatgatatctgtaaaagcaaatatcgtaaaggagctgtacac
ctgtccattctctatctgtgcaatatggcagcggcagtattgcttcaatgtacaggcgtc
atcgatatcttccgcattcttccggtaactcatctgatcatgctggtgaatgtaatttat
accgtaatattgattcgttatgaatctataaaactacaaaatgaagctgccagacatttt
aaatatccaatgtatctggtcatggcatttggtgttgcagaacttattgcttactatatc
cagcatttccagcaaacatccatcttcctcccatttggaacgatgctgtttactcttttg
ctggtttggatccaggtatcacgtttttatgatcactatctccagaaacaaaagctggtt
tacctacagaaacttgcggacacggatctgcttacagataccatgaatcgaaatgcctat
gaaaagaaagtgaatcgtcttaacgtgcagaaagacaaacttcatactaccggtcttatt
ctttttgacctggataatctgaaaataattaatgaccggtttggacatgagaaaggcgat
gaagctctgcagttatgttctcagtgcattaaacaattctttcctgataaagaaaatctt
ttccgcattggtggagatgaatttgcatatttctacaataagaataaagaaaataatatt
ggagacaaaattgctcaattaaatcaaactttagaatcaacagagcatacctttaactat
ccattaagtatttcctccggatatgcctgttttcttccggaaatggacaacacttttaaa
gaccttgcaaaacgaagtgatctcatgctgtaccgcataaaacgaaaacggaaacttgca
tatacaggcagctcagaacttctgaccagcaacacacttattaatgcaggaacatctgcc
gaggaaaagcagcaggaagaaattttcagccacacaaaaaattatcaggatttttcgctt
aaagaattatgtaatatcatcgatctgctcagcccaagcacagatggtttcctgtatatg
ctggatttcagaaccgactttttctatatttctccacaagctctggatcgtttttgtctg
cctggaaatgaattccataatatgacaaaagaacttaaagaattcgtatacaaaaaagat
tatccgcttctgaaagctgaactagataatctgctcaacacagaccggaacacacacaat
atggattaccgctggctggatcttgacagggaaccagtctggatcaactgccgtggctat
atcatacgtgacgatcagcaagagccgatctacctgatcggatgtatcaatgaaattggt
aaccggcagaaagctgataatattaccggacttctcggagagacttctttggaaaaatat
tttaaagattcggtttctacacttaataaaggcttcttgattcatgtcggaattgacggt
tttaaaatgatcaatgaaaactatggatgggattacggagactacgttcttcgagaaaca
gcgtcctgcatcttatcctgtatctcggatagccaaaaggtctacaagatagcatcagat
gaatttattatattagatacaacatcctctgatatgacaacagcatctaacctttatgac
cacatatgcaagcatattaatcagtttattgaagaaaacaactttgctgcggtatttact
atttctgccggtatcctgccgcttccggatctgtcacagaccggttatgcagaacttata
aagcgaactgacttttcgctgaccatggctaagcagcatggaagaaactgctgttatata
ttccaggaagaagagtaccagaatttcttacgtatccgcgagatcacaaatgagcttcat
tcagcagtaaatcatggtttccgtggattctcaataatcttccagccagtcatggatatc
cgacaggataaactgaccggagcagaggtgctgatacgctttacttctaaaaaatttgga
ccgatctcacctgctgagttcataccacttttagagacaagcggactgattattccaacc
ggacgctggttcatgcgagaagcaataactgcctgccggaaaatccggatgcaaattcct
gatttcaaagttaatattaatgtatcccaggtgcagatcacaaaatcagatgttattaca
gaccttatcagcgagatgaacgcttctggtcttccacctgctgcaattgcaatcgaactg
acagaaagtattctgctcgaaaaaaatgaaaaggcgcaaaacttcctgaaagaattaaaa
caggccggcttgcagttagcattggatgactttggaaccggttattccaactttcattat
ctgagtgaacttcaccctgatattgttaagattgatcgtggttttacttccaaggcaatc
acggacaaaaagaaatattatctgttaaatcagtttagtaacatgattcataatctcggt
ctgaaactttgtattgaaggtattgagacagaagacgaattacagaaaataaaacttctg
aaaccggattactgccagggattctactggggacgaccatgttcttatgatgagttcagg
aaatattttgtggatgtggacagataa
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integrated database retrieval system
