Ruminococcus torques: RTO_14460
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Entry
RTO_14460 CDS
T02606
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
rto
Ruminococcus torques
Brite
KEGG Orthology (KO) [BR:
rto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rto03400
]
RTO_14460
DNA repair and recombination proteins [BR:
rto03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RTO_14460
Archaeal homologous recombinant proteins
RTO_14460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Pullulanase_Ins
CENP-L
PAS_7
DNA_pol_E_B
Motif
Other DBs
NCBI-ProteinID:
CBL26061
UniProt:
D4M499
LinkDB
All DBs
Position
1490009..1491169
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AA seq
386 aa
AA seq
DB search
MKFFHLSDLHIGKQLHHYNLREDQEHILAEVLSYAASIHPDAIVIAGDIYDKSVPSAEAV
SLFDEFLTALAKIEPVIPVLIISGNHDSAQRLDYASRLLGSHQIYIAGQAPEEEEDGLKK
ITLTDEFGETDFWLLPFLKPGYVRKIFGGEVPESYTAAVQGILEREKIDFSRRNVLVSHQ
FYTGKGESPVTCDSEVLSVGGIDNVDISAVQEFDYVALGHLHGAQRVGQEKIRYCGTLLK
YSVSEANQKKTLHVVELKEKGSEPEIQKLPLHPLRDVRKLRGTLEEILEAEDGTGSEDYI
SVTLTDEVDPYKPKEQLERKFHHILEVRMDNERTRQKLEFSEEQIRIGTPFETFCDFYKE
MQGQEMSEQEQKILREILSEMKGEDV
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaaattttttcatttatcagacctgcatataggaaagcaattacatcactataacctc
cgggaggatcaggaacatatccttgcggaggttctttcatatgcagcgtccatacatccg
gatgcaattgttatcgcaggagacatttatgataaatccgtgccgtcggcagaagcagtc
agcttgtttgatgaattcttgacagctctggctaagattgaaccggtgattccggttctt
attatatcgggaaatcatgattcggcacagcggcttgattatgccagtcgtttgcttgga
agccatcagatttatattgcgggtcaggctccggaggaagaagaggatggtctgaaaaag
attactttgacagacgagtttggtgaaacggatttctggctgcttccatttttgaagccg
ggatatgtgcgcaagatttttggcggagaggtgccggagagttatacggcagctgtacaa
ggaattctggagagggagaagattgatttttccagaagaaatgtactggtttcccatcag
ttttatacaggaaaaggagagtctccggtaacctgtgattcggaagtattatctgttgga
ggcattgataatgtagatatttccgcagtgcaggagtttgactatgtggcacttggacat
ttacatggtgcacagagagtcggacaggagaagatccgctactgcggaacattgttgaaa
tattcagtcagcgaagcaaaccagaagaagacacttcatgtagttgaactgaaagaaaaa
gggagtgagccggaaatccagaagttgccgctgcatccacttcgtgatgtgagaaaactt
aggggaacgctggaagagatccttgaagcggaggacggaactgggagtgaagattatatc
agtgtaacgctgacagatgaggttgatccgtacaaaccgaaggaacagttggaaagaaag
ttccatcatatcctcgaagtacggatggataatgaaaggacgagacagaagcttgaattt
tctgaagaacagatacggatcggtactccgtttgaaacattttgtgatttctacaaagag
atgcaggggcaggaaatgtctgagcaggaacaaaagatcttaagagagattctaagtgaa
atgaaaggggaagacgtatga
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